RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 TMEM222Q9H0R3 208 aa12.81□□□□□ -0.36
CHFR-202ENST00000315585 UBE2J1Q9Y385 318 aaPredicted RBP12.81□□□□□ -0.36
CHFR-202ENST00000315585 A0A096LPE4 126 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 A0A1W2PPZ6 126 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 NAPSAO96009 420 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 PRSS12P56730 875 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 ZNF266Q14584 549 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 PEA15Q15121 130 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 IGFL2Q6UWQ7 119 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 GINS3Q9BRX5 216 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 SLC25A31Q9H0C2 315 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 TLNRD1Q9H1K6 362 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 GP6Q9HCN6 339 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 DMDP11532 3685 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 FAM74A7A6NL05 159 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 ZNF732B4DXR9 585 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 J3QW42 95 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 TSPAN15O95858 294 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 HLA-HP01893 362 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 CD5P06127 495 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 LPAR6P43657 344 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 NPBWR2P48146 333 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 GPM6AP51674 278 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 FAM74A3Q4VXF1 159 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 Q6ZRG5 221 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 NEK7Q8TDX7 302 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 DYRK2Q92630 601 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 TMEM56Q96MV1 263 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 ZDHHC11Q9H8X9 412 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 KPTNQ9Y664 436 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 ATP23Q9Y6H3 246 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 TMEM56-RWDD3S4R434 201 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 PTPRBP23467 1997 aa12.8□□□□□ -0.36
CHFR-202ENST00000315585 TRAV17A0A0B4J275 112 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 SS18L1O75177 396 aaPredicted RBP12.79□□□□□ -0.36
CHFR-202ENST00000315585 HEXAP06865 529 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 ADCYAP1P18509 176 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 BCL3P20749 454 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 SPIN3Q5JUX0 258 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 FDCSPQ8NFU4 85 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 SLAMF9Q96A28 289 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 POM121L2Q96KW2 1035 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 ZNF581Q9P0T4 197 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 WDFY4Q6ZS81 3184 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 LRP5LA4QPB2 252 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 PROB1E7EW31 1015 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 SLC34A2O95436 690 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 DANCRP0C864 163 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 MMP9P14780 707 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 MUC1P15941 1255 aaPredicted RBP12.79□□□□□ -0.36
CHFR-202ENST00000315585 RCC1P18754 421 aaPredicted RBP12.79□□□□□ -0.36
CHFR-202ENST00000315585 GNG3P63215 75 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 CLN3Q13286 438 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 GUCA2BQ16661 112 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 LFNGQ8NES3 379 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 OR4D5Q8NGN0 318 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 IL22RA2Q969J5 263 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 DEFB127Q9H1M4 99 aa12.79□□□□□ -0.36
CHFR-202ENST00000315585 TRBV6-6A0A0A6YYG2 114 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 CD300LBA8K4G0 201 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 SPP1P10451 314 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 NKX2-1P43699 371 aaPredicted RBP12.78□□□□□ -0.36
CHFR-202ENST00000315585 MRPL49Q13405 166 aaKnown RBP12.78□□□□□ -0.36
CHFR-202ENST00000315585 SLC35G3Q8N808 338 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 PBDC1Q9BVG4 233 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 SMIM3Q9BZL3 60 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 DLL3Q9NYJ7 618 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 MLXQ9UH92 298 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 GNRHRP30968 328 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 C9orf135Q5VTT2 229 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 MEX3BQ6ZN04 569 aaKnown RBP12.78□□□□□ -0.36
CHFR-202ENST00000315585 KDF1Q8NAX2 398 aaPredicted RBP12.78□□□□□ -0.36
CHFR-202ENST00000315585 HPSE2Q8WWQ2 592 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 KIRREL1Q96J84 757 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 PKIBQ9C010 78 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 ZNF175Q9Y473 711 aa12.78□□□□□ -0.36
CHFR-202ENST00000315585 CNTRLQ7Z7A1 2325 aa12.77□□□□□ -0.36
CHFR-202ENST00000315585 HSPA12AO43301 675 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 SFTA3P0C7M3 94 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 VDAC1P21796 283 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 KCNJ3P48549 501 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 IL24Q13007 206 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 IGSF11Q5DX21 431 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 TBC1D26Q86UD7 250 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 FAM219AQ8IW50 185 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 OR2C3Q8N628 320 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 OR5P3Q8WZ94 311 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 TP53RKQ96S44 253 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 MED13Q9UHV7 2174 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 CAMLGP49069 296 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 VAMP2P63027 116 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 SRSF3P84103 164 aaKnown RBP12.77□□□□□ -0.37
CHFR-202ENST00000315585 SRSF6Q13247 344 aaKnown RBP12.77□□□□□ -0.37
CHFR-202ENST00000315585 PDCD1Q15116 288 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 DEFB109BQ30KR1 87 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 OR52M1Q8NGK5 317 aa12.77□□□□□ -0.37
CHFR-202ENST00000315585 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms