RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 HES5Q5TA89 166 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 UBE2UQ5VVX9 321 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 RSBN1Q5VWQ0 802 aaPredicted RBP9.79□□□□□ -0.84
SCFD1-201ENST00000311943 Q6YL49 198 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 C9orf139Q6ZV77 190 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 KIR3DL3Q8N743 410 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 ZNF714Q96N38 554 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 Q9H521 79 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 BLOC1S6Q9UL45 172 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 LRRC42Q9Y546 428 aa9.79□□□□□ -0.84
SCFD1-201ENST00000311943 MEIKINA0A087WXM9 373 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 A0A1W2PPE3 182 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 ODAMA1E959 279 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 UBE2QL1A1L167 161 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 M0R1W7 72 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 SLC2A2P11168 524 aaPredicted RBP9.78□□□□□ -0.84
SCFD1-201ENST00000311943 CDK2P24941 298 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 GABRA5P31644 462 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 GPR50Q13585 617 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 ZNF773Q6PK81 442 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 FIP1L1Q6UN15 594 aaKnown RBP9.78□□□□□ -0.84
SCFD1-201ENST00000311943 CMTM4Q8IZR5 234 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 S100A13Q99584 98 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 DPCDQ9BVM2 203 aaPredicted RBP9.78□□□□□ -0.84
SCFD1-201ENST00000311943 SUCNR1Q9BXA5 334 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 ISYNA1Q9NPH2 558 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 NDUFB11Q9NX14 153 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 CLEC2LP0C7M8 214 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 GTF2F2P13984 249 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 CD24P25063 80 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 GLP1RP43220 463 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 QRFPP83859 136 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 OR51D1Q8NGF3 324 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 OR4K15Q8NH41 348 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 TMEM158Q8WZ71 300 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 IL36GQ9NZH8 169 aa9.78□□□□□ -0.84
SCFD1-201ENST00000311943 FAM181BA6NEQ2 426 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 CGB3P0DN86 165 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 CGB7P0DN87 165 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 MAPK3P27361 379 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 UBE2E1P51965 193 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 EFNB2P52799 333 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 SRSF4Q08170 494 aaKnown RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 DYNC1I2Q13409 638 aaKnown RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 DIAPH2-AS1Q14236 149 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 LY6EQ16553 131 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 C1orf100Q5SVJ3 147 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 RBMS3Q6XE24 437 aaKnown RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 USP43Q70EL4 1123 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 OR5D13Q8NGL4 314 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 TBC1D15Q8TC07 691 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 UNKLQ9H9P5 680 aaKnown RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 ZNF286AQ9HBT8 521 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 LINC00312Q9Y6C7 94 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 IGHV3-43A0A0B4J1X8 118 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 hADV38S2A0JD32 116 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 SLC22A1O15245 554 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 SOCS1O15524 211 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 ARG1P05089 322 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 IGHV3-43DP0DP04 118 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 RCC1P18754 421 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 GADD45AP24522 165 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 NFYBP25208 207 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 NKAPLQ5M9Q1 402 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 OLFML2AQ68BL7 652 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 CD200R1LQ6Q8B3 271 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 C6orf201Q7Z4U5 140 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 Q96M66 194 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 HDHD3Q9BSH5 251 aaPredicted RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 TXNL4BQ9NX01 149 aaKnown RBP9.77□□□□□ -0.85
SCFD1-201ENST00000311943 GLS2Q9UI32 602 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 HILPDAQ9Y5L2 63 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 PEX16Q9Y5Y5 336 aa9.77□□□□□ -0.85
SCFD1-201ENST00000311943 CCRL2O00421 344 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 CD37P11049 281 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 IER3P46695 156 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 BLMHQ13867 455 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 IL13RA2Q14627 380 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 SSX2Q16385 188 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 C11orf91Q3C1V1 193 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 RAB12Q6IQ22 244 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 C1orf122Q6ZSJ8 110 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 PIFOQ8TCI5 191 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 NEK7Q8TDX7 302 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 SULT4A1Q9BR01 284 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 CHCHD6Q9BRQ6 235 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 FAAP24Q9BTP7 215 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 CENPOQ9BU64 300 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 PRDM13Q9H4Q3 707 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 SEBOXQ9HB31 216 aaPredicted RBP9.76□□□□□ -0.85
SCFD1-201ENST00000311943 PLGRKTQ9HBL7 147 aa9.76□□□□□ -0.85
SCFD1-201ENST00000311943 IGHV2-26A0A0B4J1V2 119 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 CSN2P05814 226 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 ERP29P30040 261 aaKnown RBP9.75□□□□□ -0.85
SCFD1-201ENST00000311943 LSM3P62310 102 aaKnown RBP9.75□□□□□ -0.85
SCFD1-201ENST00000311943 ACTG1P63261 375 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 MXD1Q05195 221 aa9.75□□□□□ -0.85
SCFD1-201ENST00000311943 MEF2CQ06413 473 aaPredicted RBP9.75□□□□□ -0.85
SCFD1-201ENST00000311943 MOGAT2Q3SYC2 334 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms