RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FAM168AQ92567 244 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 NIPSNAP3BQ9BS92 247 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC17A5Q9NRA2 495 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 GPR27Q9NS67 375 aa9.33□□□□□ -0.92
SYNPO2-201ENST00000307142 B9A039 149 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 CHEK1O14757 476 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 PSMB6P28072 239 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 OR52B4Q8NGK2 314 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 YIPF5Q969M3 257 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 CLDN14O95500 239 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 SMIM10L1P0DMW3 83 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 S100A11P31949 105 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 VWA1Q6PCB0 445 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 SMIM10Q96HG1 83 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 RTTNQ86VV8 2226 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 PLXNA4Q9HCM2 1894 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 A0A0A6YYJ9 748 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 JTBO76095 146 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 LINC00596Q86U02 117 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 LYSMD2Q8IV50 215 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 PFDN5Q99471 154 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 RNF122Q9H9V4 155 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 SYNGR3O43761 229 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC25A4P12235 298 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 R3HDM4Q96D70 268 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 MMP15P51511 669 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 TMEM128Q5BJH2 165 aa9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF770Q6IQ21 691 aaPredicted RBP9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 TPRP12270 2363 aaKnown RBP9.32□□□□□ -0.92
SYNPO2-201ENST00000307142 TRAV39A0A0B4J263 110 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 CTAG2O75638 210 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 SNAPINO95295 136 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 PF4P02776 101 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 RRASP10301 218 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 NUP37Q8NFH4 326 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 YIPF6Q96EC8 236 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 TVP23CQ96ET8 276 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF703Q9H7S9 590 aaPredicted RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 FANCMQ8IYD8 2048 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 NUPL2O15504 423 aaKnown RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 TMEM127O75204 238 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 CST7O76096 145 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 HOXA4Q00056 320 aaPredicted RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 BSPH1Q075Z2 132 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 PLXNA3P51805 1871 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 A0A0G2JMM0 328 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 A0A1W2PPB8 328 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 A0A1W2PRS3 328 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 KIR3DP1A8MWS1 328 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 H3F3AP84243 136 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 SOHLH1Q5JUK2 328 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 PHYHD1Q5SRE7 291 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 CACNG5Q9UF02 275 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 K7N7A8 449 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 CRHP06850 196 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 PTHLHP12272 177 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 M6PRP20645 277 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 SUCLG1P53597 346 aaKnown RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 ARF6P62330 175 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 RPS4XP62701 263 aaKnown RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 CFHR1Q03591 330 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 ARRDC1Q8N5I2 433 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 OR5B3Q8NH48 314 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 LINC00052Q96N35 136 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 ASCL3Q9NQ33 180 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 SLC52A3Q9NQ40 469 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 COL4A6Q14031 1691 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 TAAR5O14804 337 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 IGHA2P01877 340 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 TAGLN2P37802 199 aaKnown RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 P2RX4Q99571 388 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF331Q9NQX6 463 aaPredicted RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 PXT1Q8NFP0 134 aa9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 HEATR1Q9H583 2144 aaKnown RBP9.31□□□□□ -0.92
SYNPO2-201ENST00000307142 FOXH1O75593 365 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 PDGFAP04085 211 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 ASAH2BP0C7U1 165 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 OR2B8PP59922 312 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 OR2F1Q13607 317 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 ZNF826PQ6ZT77 177 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 RABAC1Q9UI14 185 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 PPIAL4CA0A0B4J2A2 164 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 METTL15P1P0C7V9 234 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 LIMS3P0CW19 117 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 LIMS4P0CW20 117 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 PPIAL4GP0DN37 164 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 AKR1C3P42330 323 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 LOXL3P58215 753 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 GUCA2BQ16661 112 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 FFAR4Q5NUL3 377 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 CENPVQ7Z7K6 275 aaPredicted RBP9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 TPRX1Q8N7U7 411 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 DYRK2Q92630 601 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 RASL12Q9NYN1 266 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 DCTN6O00399 190 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 SOCS1O15524 211 aa9.3□□□□□ -0.92
SYNPO2-201ENST00000307142 OR5AC1P0C628 307 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms