RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MORN4Q8NDC4 146 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 CPEB3Q8NE35 698 aaKnown RBP11.16□□□□□ -0.62
USP38-201ENST00000307017 TM4SF19Q96DZ7 209 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 RSG1Q9BU20 258 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 C9orf172C9J069 976 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 REG1AP05451 166 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 DSCR4P56555 118 aaPredicted RBP11.16□□□□□ -0.62
USP38-201ENST00000307017 TMEM251Q8N6I4 163 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 ZPLD1Q8TCW7 415 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 RABAC1Q9UI14 185 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 CNTRLQ7Z7A1 2325 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 GUCA2BQ16661 112 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 OR1N2Q8NGR9 330 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 IL36RNQ9UBH0 155 aa11.16□□□□□ -0.62
USP38-201ENST00000307017 H3BQ15 152 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 PRR31Q5SQ13 230 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 MOGAT3Q86VF5 341 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 FADS6Q8N9I5 356 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 KCNE4Q8WWG9 221 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 LEAP2Q969E1 77 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 PTX4Q96A99 478 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 PIK3IP1Q96FE7 263 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 C4orf45Q96LM5 186 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SERPINE3A8MV23 424 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SEMA7AO75326 666 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 MMP16P51512 607 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SPCS3P61009 180 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 PRICKLE4Q2TBC4 344 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 RBPMS2Q6ZRY4 209 aaKnown RBP11.15□□□□□ -0.62
USP38-201ENST00000307017 SH2D5Q6ZV89 423 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SLC25A43Q8WUT9 341 aaPredicted RBP11.15□□□□□ -0.62
USP38-201ENST00000307017 ELSPBP1Q96BH3 223 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SCN1AP35498 2009 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 A0A1B0GV72 72 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 C1QL1O75973 258 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 PHYHIPQ92561 330 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 MRGPRX4Q96LA9 322 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 PRSS50Q9UI38 385 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 KLF13Q9Y2Y9 288 aaPredicted RBP11.15□□□□□ -0.62
USP38-201ENST00000307017 TDRD6O60522 2096 aaKnown RBP11.15□□□□□ -0.62
USP38-201ENST00000307017 CDIPTO14735 213 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 VSIG4Q9Y279 399 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 V9GYH0 126 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 LMX1BO60663 402 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 IGHV3-23P01764 117 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SOD3P08294 240 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SPATA45Q537H7 98 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 SLC23A3Q6PIS1 610 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 MSRB3Q8IXL7 192 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 FKBP11Q9NYL4 201 aa11.15□□□□□ -0.62
USP38-201ENST00000307017 RCC2Q9P258 522 aaKnown RBP11.15□□□□□ -0.62
USP38-201ENST00000307017 IGKV3-20P01619 116 aa11.15□□□□□ -0.63
USP38-201ENST00000307017 C21orf58P58505 322 aa11.15□□□□□ -0.63
USP38-201ENST00000307017 PRB3Q04118 309 aaPredicted RBP11.15□□□□□ -0.63
USP38-201ENST00000307017 KIAA1644Q3SXP7 199 aa11.15□□□□□ -0.63
USP38-201ENST00000307017 VMA21Q3ZAQ7 101 aa11.15□□□□□ -0.63
USP38-201ENST00000307017 TMEM255AQ5JRV8 349 aa11.15□□□□□ -0.63
USP38-201ENST00000307017 OR2A5Q96R48 311 aa11.15□□□□□ -0.63
USP38-201ENST00000307017 UCN2Q96RP3 112 aa11.15□□□□□ -0.63
USP38-201ENST00000307017 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 GSTZ1O43708 216 aaPredicted RBP11.14□□□□□ -0.63
USP38-201ENST00000307017 SOX8P57073 446 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 ACVR1Q04771 509 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 DEFB104AQ8WTQ1 72 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 TARM1B6A8C7 271 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 NAAAQ02083 359 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 ZNF385CQ66K41 422 aaPredicted RBP11.14□□□□□ -0.63
USP38-201ENST00000307017 DGAT2L7PQ6IED9 249 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 R3HDM4Q96D70 268 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 MBPP02686 304 aaPredicted RBP11.14□□□□□ -0.63
USP38-201ENST00000307017 MAGEA5P43359 124 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 FOXO1Q12778 655 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 SLC26A10Q8NG04 563 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 ST6GALNAC6Q969X2 333 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 SLC26A1Q9H2B4 701 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 MIXL1Q9H2W2 232 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 MRM2Q9UI43 246 aaKnown RBP11.14□□□□□ -0.63
USP38-201ENST00000307017 CA2P00918 260 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 P01737 135 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 COL8A1P27658 744 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 GCSAMLQ5JQS6 135 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 BVESQ8NE79 360 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 OR2T10Q8NGZ9 312 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 HILPDAQ9Y5L2 63 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 A0A0B4J2E0 115 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 A0A1B0GX12 115 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 ELOBQ15370 118 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 DCAF12L2Q5VW00 463 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 SYS1Q8N2H4 156 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 OR4X1Q8NH49 305 aa11.14□□□□□ -0.63
USP38-201ENST00000307017 PTPMT1Q8WUK0 201 aaPredicted RBP11.14□□□□□ -0.63
USP38-201ENST00000307017 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.14□□□□□ -0.63
USP38-201ENST00000307017 TRAV8-7A0A075B6U6 113 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 IFITM10A6NMD0 228 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 PLPP3O14495 311 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 ERVFRD-1P60508 538 aa11.13□□□□□ -0.63
USP38-201ENST00000307017 LIAT1Q6ZQX7 453 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms