RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 KLHDC2Q9Y2U9 406 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 IGHV1-45A0A0A0MS14 117 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 A0A0J9YW62 118 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 TO15178 435 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 CSRP3P50461 194 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 FUT5Q11128 374 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 FAM122AQ96E09 287 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 PCDHGA9Q9Y5G4 932 aaKnown RBP13.96□□□□□ -0.17
USP42-201ENST00000306177 ARID2Q68CP9 1835 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 PLA2G10O15496 165 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 ZNF737O75373 536 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 NANOS3P60323 173 aaKnown RBP13.96□□□□□ -0.17
USP42-201ENST00000306177 PAX5Q02548 391 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 TMEM241Q24JQ0 296 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 FAM27BQ5VT28 67 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 PTX4Q96A99 478 aa13.96□□□□□ -0.17
USP42-201ENST00000306177 RP1P56715 2156 aa13.96□□□□□ -0.18
USP42-201ENST00000306177 PIGYQ3MUY2 71 aa13.96□□□□□ -0.18
USP42-201ENST00000306177 ANGPTL6Q8NI99 470 aa13.96□□□□□ -0.18
USP42-201ENST00000306177 TTRP02766 147 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 ZNF79Q15937 498 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 TET1Q8NFU7 2136 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 LURAP1Q96LR2 239 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 WDR61Q9GZS3 305 aaKnown RBP13.95□□□□□ -0.18
USP42-201ENST00000306177 NXF2Q9GZY0 626 aaKnown RBP13.95□□□□□ -0.18
USP42-201ENST00000306177 PRR13Q9NZ81 148 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 KIR3DL2P43630 455 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 HLA-DRB3P79483 266 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 FNDC7Q5VTL7 733 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 SLC24A4Q8NFF2 622 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 OR1L4Q8NGR5 311 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 SLC2A9Q9NRM0 540 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 DNAJC13O75165 2243 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 SLC25A5P05141 298 aaKnown RBP13.95□□□□□ -0.18
USP42-201ENST00000306177 ANKRD34CP0C6C1 535 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 DYNLT3P51808 116 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 PRSS53Q2L4Q9 553 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 MYPOPQ86VE0 399 aaPredicted RBP13.95□□□□□ -0.18
USP42-201ENST00000306177 SLC25A22Q9H936 323 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 CCL28Q9NRJ3 127 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 ZDBF2Q9HCK1 2354 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 CLDN34H7C241 214 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 CXCL3P19876 107 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 MDP1Q86V88 176 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 ANGPTL4Q9BY76 406 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 SH2D2AQ9NP31 389 aa13.95□□□□□ -0.18
USP42-201ENST00000306177 OPN1MWP04001 364 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OPN1MW2P0DN77 364 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OPN1MW3P0DN78 364 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 RNF212Q495C1 297 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OR8B3Q8NGG8 313 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OR8B2Q96RD0 313 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 GPX7Q96SL4 187 aaPredicted RBP13.94□□□□□ -0.18
USP42-201ENST00000306177 ZNF665Q9H7R5 613 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 RPL36A-HNRNPH2H7BZ11 118 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 CDX4O14627 284 aaPredicted RBP13.94□□□□□ -0.18
USP42-201ENST00000306177 UPK3AO75631 287 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 MBPP02686 304 aaPredicted RBP13.94□□□□□ -0.18
USP42-201ENST00000306177 FGF5P12034 268 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 ATP5SQ99766 215 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OPN4Q9UHM6 478 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 SIRT4Q9Y6E7 314 aaPredicted RBP13.94□□□□□ -0.18
USP42-201ENST00000306177 BRCA1P38398 1863 aaKnown RBP13.94□□□□□ -0.18
USP42-201ENST00000306177 RGS13O14921 159 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 SOX15O60248 233 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 GCM2O75603 506 aaPredicted RBP13.94□□□□□ -0.18
USP42-201ENST00000306177 CD200P41217 278 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 EFNB2P52799 333 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 SEZ6L2Q6UXD5 910 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OR2W1Q9Y3N9 320 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
USP42-201ENST00000306177 MGAT2Q10469 447 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 TRAPPC1Q9Y5R8 145 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 POMT1Q9Y6A1 747 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 C4orf51C9J302 202 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 K7ESF4 209 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 GNG4P50150 75 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OR4A4PQ8NGN8 299 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 OR1A1Q9P1Q5 309 aa13.94□□□□□ -0.18
USP42-201ENST00000306177 CHST1O43916 411 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 TOX4O94842 621 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 HPXP02790 462 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 IL11P20809 199 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 TNXAQ16473 311 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 ZXDCQ2QGD7 858 aaPredicted RBP13.93□□□□□ -0.18
USP42-201ENST00000306177 ASCL5Q7RTU5 278 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 A0A0U1RQV5 110 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 SMIM17P0DL12 118 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 HLA-GP17693 338 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 CD300CQ08708 224 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 HOGA1Q86XE5 327 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 MED19A0JLT2 244 aaPredicted RBP13.93□□□□□ -0.18
USP42-201ENST00000306177 GOSR1O95249 250 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 DDA1Q9BW61 102 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 MS4A5Q9H3V2 200 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 MMP24Q9Y5R2 645 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 A0A1W2PPC1 479 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 C16orf97H3BN30 126 aa13.93□□□□□ -0.18
USP42-201ENST00000306177 CELA2AP08217 269 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms