RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 SPRY3O43610 288 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 OR2A4O95047 310 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 GLAP06280 429 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 NFYAP23511 347 aaPredicted RBP12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 ZNF81P51508 661 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 SPIN3Q5JUX0 258 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 POC1AQ8NBT0 407 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 OR2A7Q96R45 310 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 AIFM2Q9BRQ8 373 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 FXYD6Q9H0Q3 95 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 Q9N2K0 584 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 OPN4Q9UHM6 478 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 TRAV24A0A0B4J272 114 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 C4BPBP20851 252 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 DCAF12L2Q5VW00 463 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 SSX8Q7RTT4 187 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 OR11H4Q8NGC9 324 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 METTL8Q9H825 291 aaKnown RBP12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 SLC23A1Q9UHI7 598 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 TRAPPC2LQ9UL33 140 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 CCL21O00585 134 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 ABCD4O14678 606 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 SFT2D2O95562 160 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 HAND1O96004 215 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 IGHV3-13P01766 116 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 ZNF250P15622 560 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 CCKARP32238 428 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 MDH2P40926 338 aaKnown RBP12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 SMIM21Q3B7S5 101 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 ZNF565Q8N9K5 539 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 SEC22AQ96IW7 307 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 RTBDNQ9BSG5 229 aaPredicted RBP12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 COQ3Q9NZJ6 369 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 PIPOXQ9P0Z9 390 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 KCNIP3Q9Y2W7 256 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 MEMO1Q9Y316 297 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 ATP23Q9Y6H3 246 aa12.3□□□□□ -0.44
SHCBP1-201ENST00000303383 PLCE1Q9P212 2302 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 CEACAM18A8MTB9 384 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 VSTM5A8MXK1 200 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 SFTPCP11686 197 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 DAZAP2Q15038 168 aaPredicted RBP12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 CLEC18BQ6UXF7 455 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 SLC51BQ86UW2 128 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 OR5M8Q8NGP6 311 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 LRRC29Q8WV35 223 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 ASB13Q8WXK3 278 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 SLA2Q9H6Q3 261 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 POLEQ07864 2286 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 COL6A6A6NMZ7 2263 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 TRDCB7Z8K6 153 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 NAPSAO96009 420 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 CTXN2P0C2S0 81 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 ATRXP46100 2492 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 ERVK11-1P61568 191 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 ATXN7L3Q14CW9 347 aaPredicted RBP12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 LRRC37A5PQ49AS3 106 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 DHRS11Q6UWP2 260 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 SEZ6L2Q6UXD5 910 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 GSG1LQ6UXU4 331 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 PRR18Q8N4B5 295 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 C9orf62Q8N4C0 152 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 DNAJB11Q9UBS4 358 aa12.29□□□□□ -0.44
SHCBP1-201ENST00000303383 WNT9BO14905 357 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 TNFSF4P23510 183 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 Q5BKY6 102 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 IL1F10Q8WWZ1 152 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 GON7Q9BXV9 100 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 RGS11O94810 467 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 SCTP09683 121 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 PIGPP57054 158 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 NKX6-1P78426 367 aaPredicted RBP12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 SORDQ00796 357 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 FGL1Q08830 312 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 WDR82Q6UXN9 313 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 C22orf34Q6ZV56 151 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 ST6GALNAC3Q8NDV1 305 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 TMEM171Q8WVE6 324 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 GTF3AQ92664 365 aaKnown RBP12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 TMEM230Q96A57 120 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 FAM90A27PA6NNH2 459 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 L7N2F9 121 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 HSPA12AO43301 675 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 IFNA2P01563 188 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 ZNF146Q15072 292 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 PHLDA2Q53GA4 152 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 Q6P435 159 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 OR2V2Q96R30 315 aa12.28□□□□□ -0.44
SHCBP1-201ENST00000303383 PPP3CBP16298 524 aa12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 AADACP22760 399 aa12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 SSTR2P30874 369 aa12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 CA7P43166 264 aa12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 CEBPDP49716 269 aaPredicted RBP12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 IFITM2Q01629 132 aa12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 CCDC71LQ8N9Z2 235 aa12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 SVIPQ8NHG7 77 aa12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 MRPL30Q8TCC3 161 aaKnown RBP12.27□□□□□ -0.44
SHCBP1-201ENST00000303383 IFT22Q9H7X7 185 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms