RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 FOXF2Q12947 444 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 H3F3CQ6NXT2 135 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 GAPTQ8N292 157 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 SSSCA1O60232 199 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 PPYP01298 95 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 IL2RAP01589 272 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 MPGP29372 298 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 GCH1P30793 250 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 TNFSF10P50591 281 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 PPP1CBP62140 327 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 POLR2GP62487 172 aaKnown RBP eCLIP7.98□□□□□ -1.13
PRDM9-201ENST00000296682 PRAMEF6Q5VXH4 476 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 DPPA2Q7Z7J5 298 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 FAM58AQ8N1B3 248 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 IP6K3Q96PC2 410 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 SUCNR1Q9BXA5 334 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 EIF5A2Q9GZV4 153 aaKnown RBP7.98□□□□□ -1.13
PRDM9-201ENST00000296682 RGCCQ9H4X1 137 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 ZFHX4Q86UP3 3567 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 H0YL77 283 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 WNT9BO14905 357 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 BMP5P22003 454 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 GNG3P63215 75 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 NHLH2Q02577 135 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 CMTM1Q8IZ96 169 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 SLC38A6Q8IZM9 456 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 FAM89BQ8N5H3 189 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 OR52M1Q8NGK5 317 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 HPSE2Q8WWQ2 592 aa7.98□□□□□ -1.13
PRDM9-201ENST00000296682 CACNA1BQ00975 2339 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 FAM24AA6NFZ4 105 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 WNT5AP41221 380 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 TMEM33P57088 247 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 TAGLNQ01995 201 aaKnown RBP7.97□□□□□ -1.13
PRDM9-201ENST00000296682 PLA2G2CQ5R387 149 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 OR10J5Q8NHC4 309 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 WDYHV1Q96HA8 205 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 RNF126Q9BV68 326 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 DNTTIP1Q9H147 329 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 OSGIN2Q9Y236 505 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 USF3Q68DE3 2245 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 SPG11Q96JI7 2443 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 LINC01387J3KSC0 135 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 CA11O75493 328 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 IL18BPO95998 194 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 S100GP29377 79 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF169Q14929 603 aaPredicted RBP7.97□□□□□ -1.13
PRDM9-201ENST00000296682 FAM209AQ5JX71 171 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 FAHD2BQ6P2I3 314 aaPredicted RBP7.97□□□□□ -1.13
PRDM9-201ENST00000296682 EIF4E3Q8N5X7 224 aaKnown RBP7.97□□□□□ -1.13
PRDM9-201ENST00000296682 SUMF2Q8NBJ7 301 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 CCDC54Q8NEL0 328 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 BPIFCQ8NFQ6 507 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 FAHD2AQ96GK7 314 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 LOXL4Q96JB6 756 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 C20orf24Q9BUV8 137 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 REPIN1Q9BWE0 567 aaKnown RBP7.97□□□□□ -1.13
PRDM9-201ENST00000296682 RAB18Q9NP72 206 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 FBXL17Q9UF56 701 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 NKX2-6A6NCS4 301 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 M0R1B8 84 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 IL2RGP31785 369 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 CD80P33681 288 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 PPT1P50897 306 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 CEACAM21Q3KPI0 293 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 RGS7BPQ6MZT1 257 aaPredicted RBP7.97□□□□□ -1.13
PRDM9-201ENST00000296682 TBC1D26Q86UD7 250 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF573Q86YE8 665 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 LGI3Q8N145 548 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 ZADH2Q8N4Q0 377 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 ZNF610Q8N9Z0 462 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 CCDC71LQ8N9Z2 235 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 OR10V1Q8NGI7 309 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 LRRC46Q96FV0 321 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 POM121L2Q96KW2 1035 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 NAA60Q9H7X0 242 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 DNAJB11Q9UBS4 358 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 RFNGQ9Y644 331 aa7.97□□□□□ -1.13
PRDM9-201ENST00000296682 TRAV17A0A0B4J275 112 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 DBX1A6NMT0 343 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 PROB1E7EW31 1015 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 ACTL6AO96019 429 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 CAMLGP49069 296 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 FHITP49789 147 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 AKR1D1P51857 326 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 EDDM3BP56851 147 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 FOXC1Q12948 553 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 FAM76BQ5HYJ3 339 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 RTL6Q6ICC9 239 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 FAM53AQ6NSI3 398 aaPredicted RBP7.96□□□□□ -1.13
PRDM9-201ENST00000296682 TMEM65Q6PI78 240 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 CCDC36Q8IYA8 594 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 SLC35G3Q8N808 338 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 OR2Z1Q8NG97 314 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 OR1K1Q8NGR3 316 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 TP53RKQ96S44 253 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 PRRX2Q99811 253 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 SPRY4Q9C004 299 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 FAM117AQ9C073 453 aa7.96□□□□□ -1.13
PRDM9-201ENST00000296682 KIF25Q9UIL4 384 aa7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms