RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 UCP3P55916 312 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 ZNF169Q14929 603 aaPredicted RBP11.93□□□□□ -0.5
NXF1-201ENST00000294172 ACSF3Q4G176 576 aaPredicted RBP11.93□□□□□ -0.5
NXF1-201ENST00000294172 MEX3BQ6ZN04 569 aaKnown RBP11.93□□□□□ -0.5
NXF1-201ENST00000294172 C20orf204Q6ZNR8 217 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 WDR86Q86TI4 376 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 CCDC71LQ8N9Z2 235 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 GALNT14Q96FL9 552 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 CNTNAP3BQ96NU0 1288 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 ADAT1Q9BUB4 502 aaKnown RBP11.93□□□□□ -0.5
NXF1-201ENST00000294172 CNTNAP3Q9BZ76 1288 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 PKIBQ9C010 78 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 OR2S2Q9NQN1 319 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 CYTL1Q9NRR1 136 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 DLL3Q9NYJ7 618 aa11.93□□□□□ -0.5
NXF1-201ENST00000294172 TRDCB7Z8K6 153 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 DEGS1O15121 323 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 CEACAM4O75871 244 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
NXF1-201ENST00000294172 PSG7Q13046 419 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 SMCO1Q147U7 214 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 HERPUD1Q15011 391 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 Q6ZS49 121 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 EIF4E3Q8N5X7 224 aaKnown RBP11.92□□□□□ -0.5
NXF1-201ENST00000294172 ZNF565Q8N9K5 539 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 GLYATL2Q8WU03 294 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 AQP10Q96PS8 301 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 SUCNR1Q9BXA5 334 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 PLSCR2Q9NRY7 297 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 KIR2DS1A0A191URI9 304 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 J3QW42 95 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 CDIPTO14735 213 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 GRPP07492 148 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 GNRHRP30968 328 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 KIR2DS1Q14954 304 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 LINC00596Q86U02 117 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 BOLLQ8N9W6 283 aaKnown RBP11.92□□□□□ -0.5
NXF1-201ENST00000294172 SPERTQ8NA61 448 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 GPHA2Q96T91 129 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 TAS2R3Q9NYW6 316 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 TUBD1Q9UJT1 453 aa11.92□□□□□ -0.5
NXF1-201ENST00000294172 CACNA1GO43497 2377 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 INTS1Q8N201 2190 aaKnown RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 LRP5LA4QPB2 252 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 MPPED1O15442 326 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 RAC2P15153 192 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 SELEP16581 610 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 RCC1P18754 421 aaPredicted RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 MPV17P39210 176 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 OR2A2Q6IF42 318 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 LGI3Q8N145 548 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 WDR31Q8NA23 367 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 STOML3Q8TAV4 291 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 MRPL30Q8TCC3 161 aaKnown RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 MSI2Q96DH6 328 aaKnown RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 OPN3Q9H1Y3 402 aaPredicted RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 DNAJB11Q9UBS4 358 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 ATP23Q9Y6H3 246 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 C3orf85A0A1B0GTC6 90 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 AHRRA9YTQ3 701 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 H0YL77 283 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 K7EPK0 472 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 SIRPB1O00241 398 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 WDR1O75083 606 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 CNOT4O95628 575 aaKnown RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 HKR1P10072 659 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 CBR1P16152 277 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 IL13RA2Q14627 380 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 SRSF7Q16629 238 aaKnown RBP eCLIP11.91□□□□□ -0.5
NXF1-201ENST00000294172 CXorf67Q86X51 503 aaPredicted RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 GAPTQ8N292 157 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 FAM71E2Q8N5Q1 922 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 ZNF610Q8N9Z0 462 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 LHFPL5Q8TAF8 219 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 KLF14Q8TD94 323 aaPredicted RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 TMED6Q8WW62 240 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 C18orf12Q96KH6 178 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 SLC5A7Q9GZV3 580 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 OBP2BQ9NPH6 170 aa11.91□□□□□ -0.5
NXF1-201ENST00000294172 FBXO9Q9UK97 447 aaPredicted RBP11.91□□□□□ -0.5
NXF1-201ENST00000294172 IGKV1D-13A0A0B4J2D9 117 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 HSD17B6O14756 317 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 TM4SF5O14894 197 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 DEDDO75618 318 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 APOC3P02656 99 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 IGKV1-13P0DP09 117 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 ATF4P18848 351 aaPredicted RBP11.9□□□□□ -0.5
NXF1-201ENST00000294172 COX5AP20674 150 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 ZNF154Q13106 437 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 OR8G1Q15617 311 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 ALKBH2Q6NS38 261 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 TBC1D26Q86UD7 250 aa11.9□□□□□ -0.5
NXF1-201ENST00000294172 RIMS4Q9H426 269 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms