RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 IFT22Q9H7X7 185 aa14.12□□□□□ -0.15
HIF3A-203ENST00000291300 HES4Q9HCC6 221 aa14.12□□□□□ -0.15
HIF3A-203ENST00000291300 KIAA2026Q5HYC2 2103 aa14.12□□□□□ -0.15
HIF3A-203ENST00000291300 ARID1AO14497 2285 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 KALRNO60229 2985 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 PAN3Q58A45 887 aaKnown RBP14.11□□□□□ -0.15
HIF3A-203ENST00000291300 Q6ZS49 121 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 LDLRAD3Q86YD5 345 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 OR5T2Q8NGG2 359 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 MOB3AQ96BX8 217 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 GPHA2Q96T91 129 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 TLNRD1Q9H1K6 362 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 PIGMQ9H3S5 423 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 TMEM165Q9HC07 324 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 IGKV1D-13A0A0B4J2D9 117 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 A0A1B0GWJ7 208 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 C5orf51A6NDU8 294 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 CRYM-AS1A6NIL9 109 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 RFPL4AA6NLU0 287 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 RFPL4AL1F8VTS6 287 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 PSPNO60542 156 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 RGS11O94810 467 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 THBDP07204 575 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 IGKV1-13P0DP09 117 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 ZNF250P15622 560 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 UCNP55089 124 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 ATXN7L3Q14CW9 347 aaPredicted RBP14.11□□□□□ -0.15
HIF3A-203ENST00000291300 ZNF146Q15072 292 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 TEX261Q6UWH6 196 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 OR10C1Q96KK4 312 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 SPACA1Q9HBV2 294 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 JKAMPQ9P055 326 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 METRNQ9UJH8 293 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 U3KQ87 197 aa14.11□□□□□ -0.15
HIF3A-203ENST00000291300 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-203ENST00000291300 TRDCB7Z8K6 153 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 L7N2F9 121 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 SLC34A2O95436 690 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 PTBP3O95758 552 aaKnown RBP14.1□□□□□ -0.15
HIF3A-203ENST00000291300 PPYP01298 95 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 TUBG1P23258 451 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 CD40P25942 277 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 OPCMLQ14982 345 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 LPCAT3Q6P1A2 487 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 ZNF880Q6PDB4 577 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 CLEC4MQ9H2X3 399 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-203ENST00000291300 TUBG2Q9NRH3 451 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 ATP23Q9Y6H3 246 aa14.1□□□□□ -0.15
HIF3A-203ENST00000291300 TPD52L2O43399 206 aaKnown RBP14.09□□□□□ -0.15
HIF3A-203ENST00000291300 HOXB5P09067 269 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 EGR1P18146 543 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 GLRXP35754 106 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 AP2S1P53680 142 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-203ENST00000291300 SNTB1Q13884 538 aaKnown RBP14.09□□□□□ -0.15
HIF3A-203ENST00000291300 PCSK4Q6UW60 755 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 WFDC8Q8IUA0 241 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 Q8IYB0 196 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 USB1Q9BQ65 265 aaKnown RBP14.09□□□□□ -0.15
HIF3A-203ENST00000291300 MRPL37Q9BZE1 423 aaKnown RBP14.09□□□□□ -0.15
HIF3A-203ENST00000291300 C1orf123Q9NWV4 160 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 ROS1P08922 2347 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 TEX13DA0A0J9YY54 714 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-203ENST00000291300 HMSDA8MTL9 139 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 C16orf97H3BN30 126 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 HAND1O96004 215 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 IGHV3-13P01766 116 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 HTR2BP41595 481 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 GLP1RP43220 463 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 ACP7Q6ZNF0 438 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 TMUB2Q71RG4 321 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 ZNF680Q8NEM1 530 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 PCNPQ8WW12 178 aaKnown RBP14.09□□□□□ -0.15
HIF3A-203ENST00000291300 RHOFQ9HBH0 211 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 SLC2A9Q9NRM0 540 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 POLEQ07864 2286 aa14.09□□□□□ -0.15
HIF3A-203ENST00000291300 NBASA2RRP1 2371 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 PIEZO1Q92508 2521 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 TRBV6-6A0A0A6YYG2 114 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 hCG_1807616A0A1W2PRN6 198 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 IFNA2P01563 188 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 GNRHRP30968 328 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 SRSF7Q16629 238 aaKnown RBP eCLIP14.08□□□□□ -0.16
HIF3A-203ENST00000291300 C3orf36Q3SXR2 165 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 ZNF497Q6ZNH5 498 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 COQ8AQ8NI60 647 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 RTN4IP1Q8WWV3 396 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-203ENST00000291300 RASL12Q9NYN1 266 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 CACNA1DQ01668 2161 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 A0A0B4J2A0 478 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 SPRY3O43610 288 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 ACAA1P09110 424 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-203ENST00000291300 OR5AC1P0C628 307 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 ECI1P42126 302 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 RBM39Q14498 530 aaKnown RBP14.08□□□□□ -0.16
HIF3A-203ENST00000291300 C11orf87Q6NUJ2 197 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 SGPP2Q8IWX5 399 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 KIRREL1Q96J84 757 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 DMRTA2Q96SC8 542 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 RSRP1Q9BUV0 290 aa14.08□□□□□ -0.16
HIF3A-203ENST00000291300 OR1A1Q9P1Q5 309 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms