RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SPTBN1Q01082 2364 aaKnown RBP13.77□□□□□ -0.21
SMAD6-201ENST00000288840 MPPED1O15442 326 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 SYNGR1O43759 233 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 NDUFA6P56556 154 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 DHRS11Q6UWP2 260 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 OR4A4PQ8NGN8 299 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 NPIPB13A6NJU9 1138 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 NPIPB4C9JG80 1138 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 FABP6P51161 128 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 DVL1P1P54792 670 aaPredicted RBP13.76□□□□□ -0.21
SMAD6-201ENST00000288840 FGF8P55075 233 aaPredicted RBP13.76□□□□□ -0.21
SMAD6-201ENST00000288840 ALKBH6Q3KRA9 238 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 NSUN5P2Q63ZY6 315 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 WNT5BQ9H1J7 359 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 CHST1O43916 411 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 GPR137BO60478 399 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 KLF7O75840 302 aaPredicted RBP13.76□□□□□ -0.21
SMAD6-201ENST00000288840 OR2C1O95371 312 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 METTL15P1P0C7V9 234 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 BMP5P22003 454 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 PPP1CCP36873 323 aaKnown RBP13.76□□□□□ -0.21
SMAD6-201ENST00000288840 FAM3AP98173 230 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 MRPL49Q13405 166 aaKnown RBP13.76□□□□□ -0.21
SMAD6-201ENST00000288840 OR1K1Q8NGR3 316 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 IP6K3Q96PC2 410 aa13.76□□□□□ -0.21
SMAD6-201ENST00000288840 C7orf77A4D0Y5 90 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 LYZL6O75951 148 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 KRASP01116 189 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 GABRA2P47869 451 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 EIF2S3LQ2VIR3 472 aaKnown RBP13.75□□□□□ -0.21
SMAD6-201ENST00000288840 ATP1A1-AS1Q5TC04 95 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 M1APQ8TC57 530 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 TP53RKQ96S44 253 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 TWSG1Q9GZX9 223 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 MYOZ1Q9NP98 299 aaPredicted RBP13.75□□□□□ -0.21
SMAD6-201ENST00000288840 KCNIP1Q9NZI2 227 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 AUP1Q9Y679 476 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 IGKV1-27A0A075B6S5 117 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 DEDDO75618 318 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 SSX9Q7RTT3 188 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 ZIC4Q8N9L1 334 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 LIPGQ9Y5X9 500 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 TNFSF15O95150 251 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 FGF5P12034 268 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 DNM1P46Q6ZS02 220 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 WDR54Q9H977 334 aa13.75□□□□□ -0.21
SMAD6-201ENST00000288840 IGKV1-12A0A0C4DH73 117 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 A0A0U1RQK1 487 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 IGKV1D-12P01611 117 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 CST2P09228 141 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 HGFACQ04756 655 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 AQP10Q96PS8 301 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 ZFHX2Q9C0A1 2572 aaPredicted RBP13.74□□□□□ -0.21
SMAD6-201ENST00000288840 KIR2DS1A0A191URI9 304 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 CRYM-AS1A6NIL9 109 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 FBP1P09467 338 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 KIR2DS4P43632 304 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 DYNLT3P51808 116 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 KIR2DS1Q14954 304 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 FADS6Q8N9I5 356 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 NECAP1Q8NC96 275 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 C1orf147Q96MC9 270 aaPredicted RBP13.74□□□□□ -0.21
SMAD6-201ENST00000288840 SEC11CQ9BY50 192 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 DEFB108AA8MXU0 73 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 RBM11P57052 281 aaKnown RBP13.74□□□□□ -0.21
SMAD6-201ENST00000288840 EWSR1Q01844 656 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■□□□ 13.2
SMAD6-201ENST00000288840 ZNF816Q0VGE8 651 aaPredicted RBP13.74□□□□□ -0.21
SMAD6-201ENST00000288840 SLC10A1Q14973 349 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 DTX1Q86Y01 620 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 RARRES2Q99969 163 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 DEPPQ9NTK1 212 aa13.74□□□□□ -0.21
SMAD6-201ENST00000288840 MED13LQ71F56 2210 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 CEBPZOSA8MTT3 80 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 RAC2P15153 192 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 CCDC54Q8NEL0 328 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 RBMXL1Q96E39 390 aaKnown RBP13.73□□□□□ -0.21
SMAD6-201ENST00000288840 SAT2Q96F10 170 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-201ENST00000288840 COLQQ9Y215 455 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-201ENST00000288840 ZNF727A8MUV8 499 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 H7C1Q1 480 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 SERPINA7P05543 415 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 SURF2Q15527 256 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-201ENST00000288840 C1orf210Q8IVY1 113 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 TMEM105Q8N8V8 129 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 ZNF709Q8N972 641 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 ADAMTS17Q8TE56 1095 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 EML6Q6ZMW3 1958 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 PINLYPA6NC86 204 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 CD46P15529 392 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 MPLP40238 635 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 FABP9Q0Z7S8 132 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 KIAA0141Q14154 515 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-201ENST00000288840 NCMAPQ5T1S8 102 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 CPEB3Q8NE35 698 aaKnown RBP13.73□□□□□ -0.21
SMAD6-201ENST00000288840 APOBEC3DQ96AK3 386 aaPredicted RBP13.73□□□□□ -0.21
SMAD6-201ENST00000288840 SIGLEC12Q96PQ1 595 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 ABHD14AQ9BUJ0 271 aa13.73□□□□□ -0.21
SMAD6-201ENST00000288840 CYTL1Q9NRR1 136 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms