RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 EXT1Q16394 746 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SOHLH1Q5JUK2 328 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SLC25A30Q5SVS4 291 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 H3F3CQ6NXT2 135 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 DGAT2L6Q6ZPD8 337 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LDLRAD3Q86YD5 345 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR5AS1Q8N127 324 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MUC20Q8N307 709 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 NPEPL1Q8NDH3 523 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR5AU1Q8NGC0 362 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR1J2Q8NGS2 313 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR51H1Q8NH63 302 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 RDH5Q92781 318 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 YIPF5Q969M3 257 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CPNE4Q96A23 557 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 CLDN23Q96B33 292 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SGK3Q96BR1 496 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 VSTM2LQ96N03 204 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 GABRG3Q99928 467 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 DEFB127Q9H1M4 99 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LHX9Q9NQ69 397 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MRM2Q9UI43 246 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF230Q9UIE0 474 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 TIMM10BQ9Y5J6 103 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FLVCR1Q9Y5Y0 555 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 AHCTF1Q8WYP5 2266 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IGHV1OR21-1A0A087WYE8 117 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PIGBOS1A0A0B4J2F0 54 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 C5orf49A4QMS7 147 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LILRA5A6NI73 299 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PPIAL4DF5H284 164 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IMPA2O14732 288 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 GPR137BO60478 399 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF354AO60765 605 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 NDUFB6O95139 128 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 NXPH2O95156 264 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 NRASP01111 189 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 IGHA1P01876 353 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 UMODP07911 640 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 HOXC4P09017 264 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR5H8P0DN80 308 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR13C7P0DN81 318 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MGMTP16455 207 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CNR1P21554 472 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FKBP2P26885 142 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 CD80P33681 288 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MPLP40238 635 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 EIF2S3P41091 472 aaKnown RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 P2RX3P56373 397 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 RAB4BP61018 213 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 UBE2KP61086 200 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR2F1Q13607 317 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 HLA-BQ31612 363 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SP6Q3SY56 376 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SMUG1Q53HV7 270 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ADAM5Q6NVV9 412 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LPCAT3Q6P1A2 487 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 GUSBP11Q6P575 273 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 Q6ZWC4 215 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZFP82Q8N141 532 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 LGI3Q8N145 548 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR51A4Q8NGJ6 313 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 TERB2Q8NHR7 220 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SFT2D1Q8WV19 159 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 TCTEX1D2Q8WW35 142 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FRZBQ92765 325 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 TCEAL3Q969E4 200 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 C4orf45Q96LM5 186 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 C10orf90Q96M02 699 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PFDN5Q99471 154 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SUCNR1Q9BXA5 334 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ZNF223Q9UK11 482 aaPredicted RBP2.49□□□□□ -2.01
HERC4-201ENST00000277817 TP53TG5Q9Y2B4 290 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 TET1Q8NFU7 2136 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ABCA2Q9BZC7 2435 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 MEIKINA0A087WXM9 373 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 TMEM272A0A1B0GTI8 110 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 A0A1W2PPV4 95 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 NPIPB6E9PJ23 425 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 H3BMH7 237 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 EPPINO95925 133 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SEMG1P04279 462 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CT45A8P0DMV1 189 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CT45A9P0DMV2 189 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FCGR2CP31995 323 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SELENOPP49908 381 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ERVK-16P61578 105 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 CT45A2Q5DJT8 189 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 RNLSQ5VYX0 342 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PWWP2BQ6NUJ5 590 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 FAM122CQ6P4D5 195 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 Q6ZSN1 163 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 SLC25A26Q70HW3 274 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 C20orf196Q8IYI0 205 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 D2HGDHQ8N465 521 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 GVQW1Q8N7I0 195 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 PLPP5Q8NEB5 264 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR13C8Q8NGS7 320 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 OR10AC1Q8NH08 325 aa2.49□□□□□ -2.01
HERC4-201ENST00000277817 ANGPTL6Q8NI99 470 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms