RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 IGKV1-13P0DP09 117 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 HNF4GQ14541 408 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 CLEC12BQ2HXU8 276 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 FAM90A2PQ658T7 463 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 GAPTQ8N292 157 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 MTIF3Q9H2K0 278 aaKnown RBP16.09■□□□□ 0.17
SSC4D-201ENST00000275560 A0A1W2PR77 199 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 LMO7DNF2Z398 122 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 CELA2AP08217 269 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 FOSL1P15407 271 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 PKIAP61925 76 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 WDR25Q64LD2 544 aaPredicted RBP16.09■□□□□ 0.17
SSC4D-201ENST00000275560 ZNF385CQ66K41 422 aaPredicted RBP16.09■□□□□ 0.17
SSC4D-201ENST00000275560 SSX7Q7RTT5 188 aa16.09■□□□□ 0.17
SSC4D-201ENST00000275560 C3orf80F5H4A9 247 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 CDS2O95674 445 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 DAZAP2Q15038 168 aaPredicted RBP16.08■□□□□ 0.16
SSC4D-201ENST00000275560 Q3ZCU0 254 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 SLC35E3Q7Z769 313 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 CALHM1Q8IU99 346 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 PLXDC1Q8IUK5 500 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 IL22RA1Q8N6P7 574 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 NECAP1Q8NC96 275 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 SPTSSAQ969W0 71 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 POM121Q96HA1 1249 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 SIGLEC12Q96PQ1 595 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 SIRT7Q9NRC8 400 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 MTCH2Q9Y6C9 303 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 IGHV1OR15-9A0A0B4J2B8 117 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 ZNF732B4DXR9 585 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 C1orf87Q8N0U7 546 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 PLPPR1Q8TBJ4 325 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 ULBP2Q9BZM5 246 aa16.08■□□□□ 0.16
SSC4D-201ENST00000275560 AKIRIN1Q9H9L7 192 aaPredicted RBP16.08■□□□□ 0.16
SSC4D-201ENST00000275560 LOC102723971A0A1B0GUV8 181 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 NPIPA2E9PIF3 369 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 NPIPA3F8WFD2 350 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 TSTD3H0UI37 97 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 SLC31A2O15432 143 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 NRASP01111 189 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 SCTP09683 121 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 ZFP36L1Q07352 338 aaKnown RBP16.07■□□□□ 0.16
SSC4D-201ENST00000275560 MYPOPQ86VE0 399 aaPredicted RBP16.07■□□□□ 0.16
SSC4D-201ENST00000275560 PIGCQ92535 297 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 SPSB1Q96BD6 273 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 HS3ST6Q96QI5 342 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 A0A087WZY1 265 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 A0A0G2JRQ6 117 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 DUX1O43812 170 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 MSX1P28360 303 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 RPS18P62269 152 aaKnown RBP16.07■□□□□ 0.16
SSC4D-201ENST00000275560 MALLQ13021 153 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 ZNF784Q8NCA9 323 aaPredicted RBP16.07■□□□□ 0.16
SSC4D-201ENST00000275560 RNF138Q8WVD3 245 aa16.07■□□□□ 0.16
SSC4D-201ENST00000275560 CDCA3Q99618 268 aaPredicted RBP16.07■□□□□ 0.16
SSC4D-201ENST00000275560 ELOA3CA0A087WX78 387 aaPredicted RBP16.06■□□□□ 0.16
SSC4D-201ENST00000275560 PDCD6O75340 191 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 IGLV3-19P01714 112 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 PAX9P55771 341 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 EIF3IQ13347 325 aaKnown RBP16.06■□□□□ 0.16
SSC4D-201ENST00000275560 SLC25A24Q6NUK1 477 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 RASL10BQ96S79 203 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 SMCO3A2RU48 225 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 APLNRP35414 380 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 TLE4Q04727 773 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 CCL28Q9NRJ3 127 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 RPRMQ9NS64 109 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 IL36RNQ9UBH0 155 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 CA14Q9ULX7 337 aa16.06■□□□□ 0.16
SSC4D-201ENST00000275560 TCN2P20062 427 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 UCP3P55916 312 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 HIST1H3AP68431 136 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 SHHQ15465 462 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 C10orf128Q5T292 105 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 HIST2H3PS2Q5TEC6 136 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 TMEM54Q969K7 222 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 B4GALT1P15291 398 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 EN2P19622 333 aaPredicted RBP16.05■□□□□ 0.16
SSC4D-201ENST00000275560 NTF4P34130 210 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 CNN3Q15417 329 aaKnown RBP16.05■□□□□ 0.16
SSC4D-201ENST00000275560 USF2Q15853 346 aaPredicted RBP16.05■□□□□ 0.16
SSC4D-201ENST00000275560 RAET1LQ5VY80 246 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 PLCXD3Q63HM9 321 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 OR8G5Q8NG78 346 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 M1APQ8TC57 530 aa16.05■□□□□ 0.16
SSC4D-201ENST00000275560 GNPNAT1Q96EK6 184 aaPredicted RBP16.05■□□□□ 0.16
SSC4D-201ENST00000275560 A0A1B0GU03 582 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 CRYGSP22914 178 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 TUBG1P23258 451 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 MRPS34P82930 218 aaKnown RBP16.04■□□□□ 0.16
SSC4D-201ENST00000275560 H3F3AP84243 136 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 ZNF92Q03936 586 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 ZNF726P1Q15940 193 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 SLC25A26Q70HW3 274 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 TMEM56Q96MV1 263 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 CABLES2Q9BTV7 478 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 TAAR3PQ9P1P4 343 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 LRFN1Q9P244 771 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 TMEM56-RWDD3S4R434 201 aa16.04■□□□□ 0.16
SSC4D-201ENST00000275560 CLDN34H7C241 214 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms