RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 ARRDC1Q8N5I2 433 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 MITD1Q8WV92 249 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 DYRK2Q92630 601 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 RASL12Q9NYN1 266 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 POLDIP2Q9Y2S7 368 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 ZZEF1O43149 2961 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 RLN2P04090 185 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 CA7P43166 264 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 TUSC1Q2TAM9 212 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 Q6ZR03 302 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 ACOT7LQ6ZUV0 252 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 LINC00596Q86U02 117 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 FAM58AQ8N1B3 248 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 OR5AP2Q8NGF4 316 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 MRGPRFQ96AM1 343 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 CXXC4Q9H2H0 198 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 ZNF442Q9H7R0 627 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 EDARQ9UNE0 448 aa17.48■□□□□ 0.39
LYSMD2-201ENST00000267838 RP1L1Q8IWN7 2480 aaPredicted RBP17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 C9orf170A2RU37 121 aa17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 TPD52L2O43399 206 aaKnown RBP17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 FCGR3AP08637 254 aa17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 SFTPCP11686 197 aa17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 GLRXP35754 106 aa17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 NKX6-1P78426 367 aaPredicted RBP17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 CHRFAM7AQ494W8 412 aa17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 COQ3Q9NZJ6 369 aa17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 RCC2Q9P258 522 aaKnown RBP17.47■□□□□ 0.39
LYSMD2-201ENST00000267838 IGKV1D-8A0A087WSZ0 117 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 OR2AT4A6NND4 320 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 GRPP07492 148 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 CD40P25942 277 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 IL13RA2Q14627 380 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 MSMPQ1L6U9 139 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 OR13G1Q8NGZ3 307 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 THAP6Q8TBB0 222 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 VRK1Q99986 396 aaPredicted RBP17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 MSL2Q9HCI7 577 aa17.46■□□□□ 0.39
LYSMD2-201ENST00000267838 ATP6V1G2-DDX39BF2Z307 99 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 CDIPTO14735 213 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 IL13RA1P78552 427 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 PPP1R1AQ13522 171 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 PXDC1Q5TGL8 231 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 C17orf107Q6ZR85 190 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 TMEM17Q86X19 198 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 Q8IYB0 196 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 EHFQ9NZC4 300 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 IGHV3-64DA0A0J9YX35 117 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 A0A1B0GWJ7 208 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 DUSP1P28562 367 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 ERVK11-1P61568 191 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 LY6DQ14210 128 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 LRP11Q86VZ4 500 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 TERB2Q8NHR7 220 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 PPP1R1CQ8WVI7 109 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 C12orf4Q9NQ89 552 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 DUSP13Q9UII6 198 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 ANXA10Q9UJ72 324 aa17.45■□□□□ 0.38
LYSMD2-201ENST00000267838 FAM221AA4D161 298 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 TMEM8BA6NDV4 472 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 SDCBPO00560 298 aaPredicted RBP17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 DUS4LO95620 317 aaKnown RBP17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 IGHV3-13P01766 116 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 PGA5P0DJD9 388 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 RPS23P62266 143 aaKnown RBP17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 SSX8Q7RTT4 187 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 WFDC8Q8IUA0 241 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 STPG2Q8N412 459 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 NRIP2Q9BQI9 281 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 SPACA1Q9HBV2 294 aa17.44■□□□□ 0.38
LYSMD2-201ENST00000267838 C3orf80F5H4A9 247 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 TSPAN4O14817 238 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 VHLLQ6RSH7 139 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 TMEM108Q6UXF1 575 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 INO80EQ8NBZ0 244 aaPredicted RBP17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 TMEM171Q8WVE6 324 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 OSGIN2Q9Y236 505 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 SHANK1Q9Y566 2161 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 THBDP07204 575 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 ACAA1P09110 424 aaPredicted RBP17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 ATF4P18848 351 aaPredicted RBP17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 LUMP51884 338 aaPredicted RBP17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 KLF3P57682 345 aaPredicted RBP17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 BTN1A1Q13410 526 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 C11orf53Q8IXP5 236 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 MARCH1Q8TCQ1 289 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 ZNF471Q9BX82 626 aaPredicted RBP17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 TLNRD1Q9H1K6 362 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 FN3KRPQ9HA64 309 aa17.43■□□□□ 0.38
LYSMD2-201ENST00000267838 RNF222A6NCQ9 220 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 LGALS8O00214 317 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 CCSO14618 274 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 PTAFRP25105 342 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 CYCSP99999 105 aaKnown RBP17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 MZT1Q08AG7 82 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 LHFPL1Q86WI0 220 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 SUMF2Q8NBJ7 301 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 SCGB3A2Q96PL1 93 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 IFT22Q9H7X7 185 aa17.42■□□□□ 0.38
LYSMD2-201ENST00000267838 ZNF286AQ9HBT8 521 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms