RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 TMEM178AQ8NBL3 297 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 RDH5Q92781 318 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 PINX1Q96BK5 328 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 TREM2Q9NZC2 230 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 KLF13Q9Y2Y9 288 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 MED12Q93074 2177 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 ZNF816-ZNF321PA0A0X1KG74 233 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 HS3ST1O14792 307 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 LMX1BO60663 402 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 CDX1P47902 265 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 MLF1P58340 268 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 RPS4XP62701 263 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 EWSR1Q01844 656 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 NHLH2Q02577 135 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 YRDCQ86U90 279 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 BHLHE23Q8NDY6 225 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 OR13G1Q8NGZ3 307 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 CA5BP1Q8WTZ4 195 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 RHOVQ96L33 236 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 ACTR3CQ9C0K3 210 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 SLC2A9Q9NRM0 540 aa10.1□□□□□ -0.79
CLSTN3-201ENST00000266546 A0A1B0GTI1 187 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 G3V3Q6 166 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 DEDDO75618 318 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 ATP6V0CP27449 155 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 PMP22Q01453 160 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 GFI1Q99684 422 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 ZNF71Q9NQZ8 489 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 PITPNC1Q9UKF7 332 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 GEMIN2O14893 280 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 TRGC2P03986 189 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 GALR1P47211 349 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 FDX2Q6P4F2 183 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 OR10A7Q8NGE5 316 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 GPR61Q9BZJ8 451 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 WDR13Q9H1Z4 485 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 KIAA1456Q9P272 454 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 IGKV1D-42A0A075B6H8 117 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 A0A087WV48 116 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 HSBP1L1C9JCN9 74 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 CLN5O75503 358 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 PI4KAP42356 2102 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 CARD18P57730 90 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 SRSF3P84103 164 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 KIF26BQ2KJY2 2108 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 BORCS7Q96B45 105 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 PPP1R3CQ9UQK1 317 aa10.09□□□□□ -0.79
CLSTN3-201ENST00000266546 MAP1LC3B2A6NCE7 125 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 M0R143 59 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 IL2RAP01589 272 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 COX5AP20674 150 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 DYNLT3P51808 116 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF90Q03938 601 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 MRPL14Q6P1L8 145 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 ETV3LQ6ZN32 361 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 EXTL1Q92935 676 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 MAP1LC3BQ9GZQ8 125 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 ZDHHC11Q9H8X9 412 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 PRRG2O14669 202 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 CST2P09228 141 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 DDTP30046 118 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 TGFBR3Q03167 851 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 TOMM20LQ6UXN7 152 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 CYB561D1Q8N8Q1 229 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 OR10P1Q8NGE3 313 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 CDH20Q9HBT6 801 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 ABCA1O95477 2261 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 CHD8Q9HCK8 2581 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 IGHV3-15A0A0B4J1V0 119 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 MASP2O00187 686 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 TIAF1O95411 115 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 ISG15P05161 165 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 TDGF1P13385 188 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 FGF8P55075 233 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 TMEM267Q0VDI3 215 aaPredicted RBP10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 MPV17LQ2QL34 196 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 ACER2Q5QJU3 275 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 OR2AE1Q8NHA4 323 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 TIMM10BQ9Y5J6 103 aa10.08□□□□□ -0.8
CLSTN3-201ENST00000266546 IGHV1-45A0A0A0MS14 117 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 IGLV1-36A0A0B4J1U3 117 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 CLEC18AA5D8T8 446 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 FUT6P51993 359 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 ERVS71-1P61550 626 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 STPG1Q5TH74 334 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 CLEC18CQ8NCF0 446 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 MS4A10Q96PG2 267 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 CACFD1Q9UGQ2 172 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 PDCD6O75340 191 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 DXOO77932 396 aaKnown RBP10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 PRF1P14222 555 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 TLE1Q04724 770 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 IL24Q13007 206 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 BSXQ3C1V8 233 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 POC1BQ8TC44 478 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 GNRHR2Q96P88 292 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 RAB40CQ96S21 281 aa10.07□□□□□ -0.8
CLSTN3-201ENST00000266546 ZNF586Q9NXT0 402 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms