RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ATMQ13315 3056 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 ZFP92A6NM28 416 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 H3BQ15 152 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 LILRA1O75019 489 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 KLF7O75840 302 aaPredicted RBP14.46□□□□□ -0.1
SQLE-201ENST00000265896 KLK3P07288 261 aaPredicted RBP14.46□□□□□ -0.1
SQLE-201ENST00000265896 SEC11BP0C7V7 166 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 AGAP20933 346 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 EPHA8P29322 1005 aaPredicted RBP14.46□□□□□ -0.1
SQLE-201ENST00000265896 DSCR4P56555 118 aaPredicted RBP14.46□□□□□ -0.1
SQLE-201ENST00000265896 SPINK14Q6IE38 97 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 IFI44Q8TCB0 444 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 EDARADDQ8WWZ3 215 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 GINS3Q9BRX5 216 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 HES7Q9BYE0 225 aa14.46□□□□□ -0.1
SQLE-201ENST00000265896 CEP192Q8TEP8 1941 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 A0A0G2JRQ6 117 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 C5orf49A4QMS7 147 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 PINLYPA6NC86 204 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 PDCD6O75340 191 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 NDUFS6O75380 124 aaKnown RBP14.45□□□□□ -0.1
SQLE-201ENST00000265896 CELA3AP09093 270 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 IAPPP10997 89 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 SELEP16581 610 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 CLDN15P56746 228 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 LCN15Q6UWW0 184 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 C20orf204Q6ZNR8 217 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 HIST2H3AQ71DI3 136 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 SYT3Q9BQG1 590 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 RSG1Q9BU20 258 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 GVINP1Q7Z2Y8 2422 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 CXCL12P48061 93 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 RAB35Q15286 201 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 MPV17LQ2QL34 196 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 TMEM252Q8N6L7 170 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 RNASE11Q8TAA1 199 aaKnown RBP14.45□□□□□ -0.1
SQLE-201ENST00000265896 SPSB1Q96BD6 273 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 FGF23Q9GZV9 251 aaPredicted RBP14.45□□□□□ -0.1
SQLE-201ENST00000265896 CALHM2Q9HA72 323 aa14.45□□□□□ -0.1
SQLE-201ENST00000265896 RRP8O43159 456 aaKnown RBP14.44□□□□□ -0.1
SQLE-201ENST00000265896 SYNGR1O43759 233 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 EIF1BO60739 113 aaKnown RBP14.44□□□□□ -0.1
SQLE-201ENST00000265896 RBM11P57052 281 aaKnown RBP14.44□□□□□ -0.1
SQLE-201ENST00000265896 UBE2KP61086 200 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 MRPS34P82930 218 aaKnown RBP14.44□□□□□ -0.1
SQLE-201ENST00000265896 HERPUD1Q15011 391 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 DNASE2BQ8WZ79 361 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 MOB3AQ96BX8 217 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 OR2H1Q9GZK4 316 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 VSIRQ9H7M9 311 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 RNF122Q9H9V4 155 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 DEPPQ9NTK1 212 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 GNG13Q9P2W3 67 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 NCKAP5O14513 1909 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 ZNF503-AS2A6NEH8 195 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 RBFOX3A6NFN3 312 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 CNOT4O95628 575 aaKnown RBP14.44□□□□□ -0.1
SQLE-201ENST00000265896 FAM53AQ6NSI3 398 aaPredicted RBP14.44□□□□□ -0.1
SQLE-201ENST00000265896 THNSL2Q86YJ6 484 aa14.44□□□□□ -0.1
SQLE-201ENST00000265896 UBE2CO00762 179 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 GDF1P27539 372 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 ERVFRD-1P60508 538 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 OR1J1Q8NGS3 322 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 LYPD6BQ8NI32 183 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 K7N7A8 449 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 FUT3P21217 361 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 RAC1P63000 192 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 DLK1P80370 383 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 SPNS3Q6ZMD2 512 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 DPPA2Q7Z7J5 298 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 OR4D5Q8NGN0 318 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 GALNT14Q96FL9 552 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 SUCNR1Q9BXA5 334 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 PRRG4Q9BZD6 226 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 UBE2ZQ9H832 354 aaPredicted RBP14.43□□□□□ -0.1
SQLE-201ENST00000265896 HSF4Q9ULV5 492 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 hCG_38984A0A1B0GV85 526 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 OR2B11Q5JQS5 317 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 SPSB3Q6PJ21 355 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 ODF3L1Q8IXM7 274 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 MAFAQ8NHW3 353 aaPredicted RBP14.43□□□□□ -0.1
SQLE-201ENST00000265896 Q8WTZ3 238 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 CPNE4Q96A23 557 aaPredicted RBP14.43□□□□□ -0.1
SQLE-201ENST00000265896 IMMP1LQ96LU5 166 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 POMT1Q9Y6A1 747 aa14.43□□□□□ -0.1
SQLE-201ENST00000265896 CYB5BO43169 146 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 PDGFBP01127 241 aaPredicted RBP14.42□□□□□ -0.1
SQLE-201ENST00000265896 LYSMD4Q5XG99 296 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 LHFPL2Q6ZUX7 228 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 PBDC1Q9BVG4 233 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 ANGPTL4Q9BY76 406 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 ZNF552Q9H707 407 aaPredicted RBP14.42□□□□□ -0.1
SQLE-201ENST00000265896 DMXL1Q9Y485 3027 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 USF3Q68DE3 2245 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 CHD3Q12873 2000 aaKnown RBP14.42□□□□□ -0.1
SQLE-201ENST00000265896 IGKV1-6A0A0C4DH72 117 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 MMP9P14780 707 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 RAB11AP62491 216 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 HIST1H3AP68431 136 aa14.42□□□□□ -0.1
SQLE-201ENST00000265896 HIST2H3PS2Q5TEC6 136 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms