RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 TSPO2Q5TGU0 170 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 OGFOD3Q6PK18 319 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 SSX7Q7RTT5 188 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 CPEB2Q7Z5Q1 589 aaKnown RBP11.39□□□□□ -0.59
NUP54-201ENST00000264883 C11orf42Q8N5U0 333 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 METTL27Q8N6F8 245 aaPredicted RBP11.39□□□□□ -0.59
NUP54-201ENST00000264883 OR5C1Q8NGR4 320 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 OR51E1Q8TCB6 317 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 ELOVL1Q9BW60 279 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 PCED1AQ9H1Q7 454 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 HIPK2Q9H2X6 1198 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 PLEKHF2Q9H8W4 249 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 DECR2Q9NUI1 292 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 B4DGG1 531 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 BCL2P10415 239 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 GALR1P47211 349 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 ADIRFQ15847 76 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 ACTL10Q5JWF8 245 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 COMMD2Q86X83 199 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 OR4D5Q8NGN0 318 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 OR5B12Q96R08 314 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 SOHLH2Q9NX45 425 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 B3GALT1Q9Y5Z6 326 aa11.39□□□□□ -0.59
NUP54-201ENST00000264883 A0A1W2PNV4 684 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 A0A1W2PPQ1 181 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 ANKUB1A6NFN9 424 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 SERPINE3A8MV23 424 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 ONECUT2O95948 504 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 ZNF728P0DKX0 622 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 TFPI2P48307 235 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 FMODQ06828 376 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 COL5A1-AS1Q5SY13 56 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 NUFIP2Q7Z417 695 aaKnown RBP11.38□□□□□ -0.59
NUP54-201ENST00000264883 ZNF441Q8N8Z8 693 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 C11orf40Q8WZ69 217 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 DDIT4LQ96D03 193 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 MS4A10Q96PG2 267 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 PCGF1Q9BSM1 259 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 TRAV1-1A0A0B4J248 108 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 IGHV1OR15-9A0A0B4J2B8 117 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 FOXI3A8MTJ6 420 aaPredicted RBP11.38□□□□□ -0.59
NUP54-201ENST00000264883 UMODP07911 640 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 CEACAM1P13688 526 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 HLA-DOBP13765 273 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 CCL1P22362 96 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 RAB7AP51149 207 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 DYNLT3P51808 116 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 HIST1H3AP68431 136 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 ETFRF1Q6IPR1 90 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 IL22RA1Q8N6P7 574 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 OR51G1Q8NGK1 321 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 OR5L1Q8NGL2 311 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 OR1N1Q8NGS0 311 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 SDSLQ96GA7 329 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 C11orf1Q9H5F2 150 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 Q9N2K0 584 aa11.38□□□□□ -0.59
NUP54-201ENST00000264883 COL6A3P12111 3177 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 TNFSF13O75888 250 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 TLE3Q04726 772 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 CLEC12BQ2HXU8 276 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 DOK3Q7L591 496 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 RABEPKQ7Z6M1 372 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 H1FOOQ8IZA3 346 aaPredicted RBP11.37□□□□□ -0.59
NUP54-201ENST00000264883 TMEM252Q8N6L7 170 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 RLN3Q8WXF3 142 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 EXTL1Q92935 676 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 MSI2Q96DH6 328 aaKnown RBP11.37□□□□□ -0.59
NUP54-201ENST00000264883 LIME1Q9H400 295 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 GPR35Q9HC97 309 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 GLRX2Q9NS18 164 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 ALKBH4Q9NXW9 302 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 FOXJ2Q9P0K8 574 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
NUP54-201ENST00000264883 NXT1Q9UKK6 140 aaKnown RBP11.37□□□□□ -0.59
NUP54-201ENST00000264883 A0A1W2PPC4 97 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 TMEM225BP0DP42 221 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 CDKN1BP46527 198 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 ZNF41P51814 821 aaPredicted RBP11.36□□□□□ -0.59
NUP54-201ENST00000264883 CNN1P51911 297 aaKnown RBP11.36□□□□□ -0.59
NUP54-201ENST00000264883 SOX8P57073 446 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
NUP54-201ENST00000264883 PRSS8Q16651 343 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 UBALD2Q8IYN6 164 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 ADPRHL1Q8NDY3 354 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 ZCCHC14Q8WYQ9 949 aaKnown RBP11.36□□□□□ -0.59
NUP54-201ENST00000264883 CLDN23Q96B33 292 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 P2RX4Q99571 388 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 ZNF665Q9H7R5 613 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 MSL2Q9HCI7 577 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 MCTS1Q9ULC4 181 aaKnown RBP11.36□□□□□ -0.59
NUP54-201ENST00000264883 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 C20orf202A1L168 122 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 PROB1E7EW31 1015 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 H7BYZ3 331 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 CST7O76096 145 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 CHRNB4P30926 498 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 RAC1P63000 192 aa11.36□□□□□ -0.59
NUP54-201ENST00000264883 CDCP2Q5VXM1 449 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms