RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 CHST1O43916 411 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 S100GP29377 79 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 NPBWR2P48146 333 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 PMS2P11Q13670 270 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 SRSF7Q16629 238 aaKnown RBP eCLIP10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 NMSQ5H8A3 153 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 ABLIM2Q6H8Q1 611 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 LMX1AQ8TE12 382 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 AGMATQ9BSE5 352 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 METTL7AQ9H8H3 244 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 PLEK2Q9NYT0 353 aa10.71□□□□□ -0.69
CHMP2B-201ENST00000263780 ADAMTS9Q9P2N4 1935 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 XKRY2A2RUG3 117 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF705GA8MUZ8 300 aaPredicted RBP10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 PPP5D1E7EU14 171 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 PIAS2O75928 621 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 GNRHRP30968 328 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF154Q13106 437 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 IQCJQ1A5X6 159 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 C16orf47Q6ZP98 133 aaPredicted RBP10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 Q6ZS49 121 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 CA5BP1Q8WTZ4 195 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM54Q969K7 222 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 RAB40CQ96S21 281 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 PSMG3Q9BT73 122 aaPredicted RBP10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 IGFLR1Q9H665 355 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF442Q9H7R0 627 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 OR14J1Q9UGF5 321 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF391Q9UJN7 358 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 ST3GAL6Q9Y274 331 aa10.71□□□□□ -0.7
CHMP2B-201ENST00000263780 EPHA1P21709 976 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 UCP1P25874 307 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM3BP58499 235 aaPredicted RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 SERF2P84101 59 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 RSPO1Q2MKA7 263 aaPredicted RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 MPV17LQ2QL34 196 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 SIGLEC12Q96PQ1 595 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 HIST1H2AAQ96QV6 131 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 MTIF3Q9H2K0 278 aaKnown RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 A0A1W2PPC4 97 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM221AA4D161 298 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 SHISA7A6NL88 538 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 DHHO43323 396 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 SLC25A6P12236 298 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 PDLIM4P50479 330 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 FUT6P51993 359 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 COL10A1Q03692 680 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 ZFP36L1Q07352 338 aaKnown RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 CLN3Q13286 438 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM241Q24JQ0 296 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 ACOT6Q3I5F7 207 aaPredicted RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 NCR3LG1Q68D85 454 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF880Q6PDB4 577 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 C17orf82Q86X59 251 aaPredicted RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 MAML2Q8IZL2 1156 aaPredicted RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 OR5D13Q8NGL4 314 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 THAP3Q8WTV1 239 aaPredicted RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 PINX1Q96BK5 328 aaKnown RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 RBM14Q96PK6 669 aaKnown RBP10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 TECTBQ96PL2 329 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 GAB2Q9UQC2 676 aa10.7□□□□□ -0.7
CHMP2B-201ENST00000263780 ZNF814B7Z6K7 855 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 VAMP5O95183 116 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 NRASP01111 189 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 IGLV3-19P01714 112 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 OPN1LWP04000 364 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 PFN1P07737 140 aaKnown RBP10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 CTXN2P0C2S0 81 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 METTL15P1P0C7V9 234 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 TNFRSF9Q07011 255 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 PIGYQ3MUY2 71 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 ODF3L1Q8IXM7 274 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 C20orf196Q8IYI0 205 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 DNASE2BQ8WZ79 361 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 DYRK2Q92630 601 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 ADGRG7Q96K78 797 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 TPSD1Q9BZJ3 242 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 MMP17Q9ULZ9 603 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 IGHV3-20A0A0C4DH32 117 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 OR2J2O76002 312 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM50AO95807 157 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 RELQ04864 619 aaPredicted RBP10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 CYP2G1PQ6ZSU1 146 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 PLXDC1Q8IUK5 500 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 NAXEQ8NCW5 288 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 NFAM1Q8NET5 270 aaPredicted RBP10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 OR2M3Q8NG83 312 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 TMEM170AQ8WVE7 144 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 NABP1Q96AH0 204 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 Q9N2K0 584 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 RPRMQ9NS64 109 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 SLC7A10Q9NS82 523 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 PRSS50Q9UI38 385 aa10.69□□□□□ -0.7
CHMP2B-201ENST00000263780 DOCK8Q8NF50 2099 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 IGKV1-27A0A075B6S5 117 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A10PA6NDY2 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A18PA6NE21 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A16PA6NEW6 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A20PA6NIJ5 464 aa10.68□□□□□ -0.7
CHMP2B-201ENST00000263780 FAM90A8PA6NJQ4 464 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms