RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 SIT1Q9Y3P8 196 aa7.86□□□□□ -1.15
MSH4-201ENST00000263187 ARGFXA6NJG6 315 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 FAM166BA8MTA8 275 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 H7C1Q1 480 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 RRP8O43159 456 aaKnown RBP7.85□□□□□ -1.15
MSH4-201ENST00000263187 SYNGR1O43759 233 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 LILRA1O75019 489 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 OR2C1O95371 312 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 FABP1P07148 127 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 FUT3P21217 361 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 RBM11P57052 281 aaKnown RBP7.85□□□□□ -1.15
MSH4-201ENST00000263187 Q0VFX4 171 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 LHFPL2Q6ZUX7 228 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 C15orf54Q8N8G6 183 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 AGBL5Q8NDL9 886 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 RNASE11Q8TAA1 199 aaKnown RBP7.85□□□□□ -1.15
MSH4-201ENST00000263187 DUSP23Q9BVJ7 150 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 SCRT1Q9BWW7 348 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 SLC35B3Q9H1N7 401 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 FAM86C1Q9NVL1 165 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 NCKAP5O14513 1909 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 DOCK11Q5JSL3 2073 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 ICE1Q9Y2F5 2266 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 CACNA1GO43497 2377 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 LOC102725191A0A1B0GVB3 256 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 ZNF503-AS2A6NEH8 195 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 PROB1E7EW31 1015 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 CHST1O43916 411 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 CNOT4O95628 575 aaKnown RBP7.85□□□□□ -1.15
MSH4-201ENST00000263187 HEXAP06865 529 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 FGF8P55075 233 aaPredicted RBP7.85□□□□□ -1.15
MSH4-201ENST00000263187 RAC3P60763 192 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 HIST1H3AP68431 136 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 DAZAP2Q15038 168 aaPredicted RBP7.85□□□□□ -1.15
MSH4-201ENST00000263187 ARL6IP1Q15041 203 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 C4orf17Q53FE4 359 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 HIST2H3PS2Q5TEC6 136 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 HIST2H3AQ71DI3 136 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 DPPA2Q7Z7J5 298 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 GGNQ86UU5 652 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 MOB3AQ96BX8 217 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 BOD1Q96IK1 185 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 PRRG4Q9BZD6 226 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 GTF3C1Q12789 2109 aa7.85□□□□□ -1.15
MSH4-201ENST00000263187 hCG_38984A0A1B0GV85 526 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 C5orf52A6NGY3 159 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 HMGB3O15347 200 aaKnown RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 TOX3O15405 576 aaPredicted RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 MT-ND4LP03901 98 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 SEC11BP0C7V7 166 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 IAPPP10997 89 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 SELEP16581 610 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 FOLR3P41439 243 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 B2MP61769 119 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ARF1P84077 181 aaKnown RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 CDPF1Q6NVV7 123 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 C20orf204Q6ZNR8 217 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 CYB561D1Q8N8Q1 229 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 GINS3Q9BRX5 216 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 SUCNR1Q9BXA5 334 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 FGF23Q9GZV9 251 aaPredicted RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 GPR35Q9HC97 309 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 PLA2G3Q9NZ20 509 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 MIOXQ9UGB7 285 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 PQLC2LA1A4F0 135 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ZNF716A6NP11 495 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ZNF732B4DXR9 585 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 CLN5O75503 358 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 TAGLN2P37802 199 aaKnown RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 FUT6P51993 359 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 NDUFA6P56556 154 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 B3GALT5-AS1P59052 145 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 RND3P61587 244 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 OR1K1Q8NGR3 316 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 GSN-AS1Q9NRJ2 163 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 GVINP1Q7Z2Y8 2422 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ADAMTS20P59510 1910 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 MED13Q9UHV7 2174 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 A0A087WZY1 265 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 A0A0G2JRQ6 117 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ZFP92A6NM28 416 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 TK1P04183 234 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 OR8U8P0C7N1 319 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 DTYMKP23919 212 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 MLF1P58340 268 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 RPS23P62266 143 aaKnown RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 PRDX4Q13162 271 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 HERPUD1Q15011 391 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ZNF239Q16600 458 aaKnown RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 CLEC12BQ2HXU8 276 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ZNF674Q2M3X9 581 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ACER2Q5QJU3 275 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 THNSL2Q86YJ6 484 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 TUSC5Q8IXB3 177 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ZNF561Q8N587 486 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 TMEM252Q8N6L7 170 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 GALNT14Q96FL9 552 aa7.84□□□□□ -1.15
MSH4-201ENST00000263187 ZNF552Q9H707 407 aaPredicted RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 NOSIPQ9Y314 301 aaKnown RBP7.84□□□□□ -1.15
MSH4-201ENST00000263187 EP300Q09472 2414 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms