RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 CCL27Q9Y4X3 112 aa10.63□□□□□ -0.71
SMG6-201ENST00000263073 RRP8O43159 456 aaKnown RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 FAM157CP0CG43 387 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 ZNF385CQ66K41 422 aaPredicted RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 ARRDC1-AS1Q9H2J1 176 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 SHISA7A6NL88 538 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 ZNF207O43670 478 aaKnown RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 PSG2P11465 335 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 COMPP49747 757 aaPredicted RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 UBE2V2Q15819 145 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 ZNF260Q3ZCT1 412 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 D2HGDHQ8N465 521 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 CYB561D1Q8N8Q1 229 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 CPEB3Q8NE35 698 aaKnown RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 ASB5Q8WWX0 329 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 SMIM12Q96EX1 92 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 GPHA2Q96T91 129 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 IL36GQ9NZH8 169 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 A0A1W2PPE3 182 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 SRSF10O75494 262 aaKnown RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 MT-CO3P00414 261 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 HTN1P15515 57 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 GABRA6Q16445 453 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 WDR25Q64LD2 544 aaPredicted RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 SPINK14Q6IE38 97 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 SLC26A10Q8NG04 563 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 MVB12AQ96EY5 273 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 ADAT3Q96EY9 351 aaPredicted RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 CLN8Q9UBY8 286 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 NDUFB3O43676 98 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 RHBDL1O75783 438 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 HINT1P49773 126 aaPredicted RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 VMA21Q3ZAQ7 101 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 SSX8Q7RTT4 187 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 PUSL1Q8N0Z8 303 aaKnown RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 ALG14Q96F25 216 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 AGFG2O95081 481 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 COL9A1P20849 921 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 OTX1P32242 354 aaPredicted RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 IL24Q13007 206 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 Q5BKY6 102 aa10.62□□□□□ -0.71
SMG6-201ENST00000263073 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
SMG6-201ENST00000263073 TGIF2-C20orf24A0A0A6YYL0 155 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 OR10J1P30954 320 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 CD160O95971 181 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 CCR5P51681 352 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 TNXAQ16473 311 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 R3HDM4Q96D70 268 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 WFDC6Q9BQY6 131 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 SH2D2AQ9NP31 389 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 EML2O95834 649 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 VSIG8P0DPA2 414 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 RPS4Y1P22090 263 aaKnown RBP10.61□□□□□ -0.71
SMG6-201ENST00000263073 ATP6V0CP27449 155 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 SUMO3P55854 103 aaPredicted RBP10.61□□□□□ -0.71
SMG6-201ENST00000263073 TGIF1Q15583 401 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 ZNF488Q96MN9 340 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 TMEM56Q96MV1 263 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 TNFSF18Q9UNG2 199 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 DTX4Q9Y2E6 619 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 MFNGO00587 321 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 FGF2P09038 288 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 IL11P20809 199 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 PSG6Q00889 435 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 LRRC10Q5BKY1 277 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 SLC7A10Q9NS82 523 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 VAX2Q9UIW0 290 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.61□□□□□ -0.71
SMG6-201ENST00000263073 OR2M5A3KFT3 312 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 TMEM50BP56557 158 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 FAM3BP58499 235 aaPredicted RBP10.61□□□□□ -0.71
SMG6-201ENST00000263073 VSTM2LQ96N03 204 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 RARRES2Q99969 163 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 OCIAD1Q9NX40 245 aa10.61□□□□□ -0.71
SMG6-201ENST00000263073 TNRC6CQ9HCJ0 1690 aaKnown RBP10.61□□□□□ -0.71
SMG6-201ENST00000263073 TRGV5A0A0B4J1U4 118 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 TMEM127O75204 238 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 STPG2Q8N412 459 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 TMEM251Q8N6I4 163 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
SMG6-201ENST00000263073 SARAFQ96BY9 339 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 SMOC1Q9H4F8 434 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 SLC52A3Q9NQ40 469 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 ST6GALNAC2Q9UJ37 374 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 XIRP1Q702N8 1843 aaKnown RBP10.6□□□□□ -0.71
SMG6-201ENST00000263073 IGHV3OR15-7A0A075B7D8 119 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 PPYP01298 95 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 C9orf50Q5SZB4 431 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 NSUN5P2Q63ZY6 315 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 FDX2Q6P4F2 183 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 C5orf17Q8NAS9 161 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 DTD1Q8TEA8 209 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 ANAPC16Q96DE5 110 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 GPX7Q96SL4 187 aaPredicted RBP10.6□□□□□ -0.71
SMG6-201ENST00000263073 MAP1LC3CQ9BXW4 147 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 TRDCB7Z8K6 153 aa10.6□□□□□ -0.71
SMG6-201ENST00000263073 MEOX1P50221 254 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms