RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 SCRT1Q9BWW7 348 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 EGLN1Q9GZT9 426 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 LUZP4Q9P127 313 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 IL36RNQ9UBH0 155 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 STARD10Q9Y365 291 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 NSG1A0A0A6YYJ2 146 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 AP4M1O00189 453 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 OTX1P32242 354 aaPredicted RBP8.68□□□□□ -1.02
LIG3-201ENST00000262327 HAGHQ16775 308 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 AARDQ4LEZ3 155 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 C10orf128Q5T292 105 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 LIAT1Q6ZQX7 453 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 NTNG2Q96CW9 530 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 MSI2Q96DH6 328 aaKnown RBP8.68□□□□□ -1.02
LIG3-201ENST00000262327 PLEKHA2Q9HB19 425 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 C19orf25Q9UFG5 118 aaPredicted RBP8.68□□□□□ -1.02
LIG3-201ENST00000262327 MMP24Q9Y5R2 645 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 URGCP-MRPS24S4R325 110 aa8.68□□□□□ -1.02
LIG3-201ENST00000262327 CXCL13O43927 109 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 SSSCA1O60232 199 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 TRAPPC6AO75865 159 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 LIFP15018 202 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 SULT1A1P50225 295 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 HERV-K104P61576 105 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 RUNX1Q01196 453 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 TCF15Q12870 199 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 CXorf66Q5JRM2 361 aaPredicted RBP8.67□□□□□ -1.02
LIG3-201ENST00000262327 SLC25A26Q70HW3 274 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 P4HA3Q7Z4N8 544 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 OSR2Q8N2R0 312 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 C15orf54Q8N8G6 183 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 OR1F12Q8NHA8 337 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 OR10J5Q8NHC4 309 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 ZNF700Q9H0M5 742 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 OPN3Q9H1Y3 402 aaPredicted RBP8.67□□□□□ -1.02
LIG3-201ENST00000262327 KCNJ16Q9NPI9 418 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 PARPBPQ9NWS1 579 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 FOXD3Q9UJU5 478 aaPredicted RBP8.67□□□□□ -1.02
LIG3-201ENST00000262327 TP53TG5Q9Y2B4 290 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 ASPMQ8IZT6 3477 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 PRSS47A8MTI9 375 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 RRP8O43159 456 aaKnown RBP8.67□□□□□ -1.02
LIG3-201ENST00000262327 ST8SIA3O43173 380 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 GPR137BO60478 399 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 RFPL3SP0C7P2 107 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 P2RY1P47900 373 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
LIG3-201ENST00000262327 RPS18P62269 152 aaKnown RBP8.67□□□□□ -1.02
LIG3-201ENST00000262327 PSG4Q00888 419 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 IGFBP7Q16270 282 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 MYPOPQ86VE0 399 aaPredicted RBP8.67□□□□□ -1.02
LIG3-201ENST00000262327 PRSS33Q8NF86 280 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 HPSE2Q8WWQ2 592 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 ATG101Q9BSB4 218 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 STRADBQ9C0K7 418 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 CRIM1Q9NZV1 1036 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 H3BP45 60 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 SYNGR3O43761 229 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 YIF1AO95070 293 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 UMODP07911 640 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 RAB5AP20339 215 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 CRYGSP22914 178 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 EWSR1Q01844 656 aaKnown RBP eCLIP8.67□□□□□ -1.02
LIG3-201ENST00000262327 OR8G1Q15617 311 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 IZUMO4Q1ZYL8 232 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 CEACAM16Q2WEN9 425 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 OR2G3Q8NGZ4 309 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 OR14L1PQ8NHC6 308 aa8.67□□□□□ -1.02
LIG3-201ENST00000262327 DNAJC13O75165 2243 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 ESPL1Q14674 2120 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 IGSF23A1L1A6 192 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 FAM27BQ5VT28 67 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 ZNF343Q6P1L6 599 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 MRPL14Q6P1L8 145 aaKnown RBP8.66□□□□□ -1.02
LIG3-201ENST00000262327 FAM180AQ6UWF9 173 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 ZNF845Q96IR2 970 aaPredicted RBP8.66□□□□□ -1.02
LIG3-201ENST00000262327 C18orf12Q96KH6 178 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 ZNF286AQ9HBT8 521 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 UBE2J1Q9Y385 318 aaPredicted RBP8.66□□□□□ -1.02
LIG3-201ENST00000262327 A0A096LPE4 126 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 A0A1W2PPZ6 126 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 H7C1Q1 480 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 HSD17B6O14756 317 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 MT-ND4LP03901 98 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 SEC11BP0C7V7 166 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 PLA2G5P39877 138 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 SUCLG1P53597 346 aaKnown RBP8.66□□□□□ -1.02
LIG3-201ENST00000262327 HIST1H3AP68431 136 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 GAMTQ14353 236 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 GNMTQ14749 295 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 ARL6IP1Q15041 203 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 CNN3Q15417 329 aaKnown RBP8.66□□□□□ -1.02
LIG3-201ENST00000262327 LBHQ53QV2 105 aaPredicted RBP8.66□□□□□ -1.02
LIG3-201ENST00000262327 WIPI1Q5MNZ9 446 aaPredicted RBP8.66□□□□□ -1.02
LIG3-201ENST00000262327 HIST2H3PS2Q5TEC6 136 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 HIST2H3AQ71DI3 136 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 LGI3Q8N145 548 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 LYPD6BQ8NI32 183 aa8.66□□□□□ -1.02
LIG3-201ENST00000262327 NEK7Q8TDX7 302 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms