RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ACSF3Q4G176 576 aaPredicted RBP11.62□□□□□ -0.55
VMP1-201ENST00000262291 CDPF1Q6NVV7 123 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 ASCL4Q6XD76 172 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 ZNF610Q8N9Z0 462 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 NANOS1Q8WY41 292 aaKnown RBP11.62□□□□□ -0.55
VMP1-201ENST00000262291 SARAFQ96BY9 339 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 RTBDNQ9BSG5 229 aaPredicted RBP11.62□□□□□ -0.55
VMP1-201ENST00000262291 UBE2CO00762 179 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 ADAP1O75689 374 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 CEACAM4O75871 244 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 FCGR3AP08637 254 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 FXYD4P59646 89 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 CEACAM21Q3KPI0 293 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 SLC22A25Q6T423 547 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 TOMM40LQ969M1 308 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 HIST1H2AAQ96QV6 131 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 CLCC1Q96S66 551 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 SEBOXQ9HB31 216 aaPredicted RBP11.62□□□□□ -0.55
VMP1-201ENST00000262291 GPR132Q9UNW8 380 aa11.62□□□□□ -0.55
VMP1-201ENST00000262291 CADP27708 2225 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 ANKRD30BLA7E2S9 258 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 MUC1P15941 1255 aaPredicted RBP11.61□□□□□ -0.55
VMP1-201ENST00000262291 ZNF14P17017 642 aaPredicted RBP11.61□□□□□ -0.55
VMP1-201ENST00000262291 TBPP20226 339 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 GABRA6Q16445 453 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 TBC1D28Q2M2D7 210 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 UQCC3Q6UW78 93 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 OR4A4PQ8NGN8 299 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 SNIP1Q8TAD8 396 aaKnown RBP11.61□□□□□ -0.55
VMP1-201ENST00000262291 CDH20Q9HBT6 801 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.61□□□□□ -0.55
VMP1-201ENST00000262291 DKK4Q9UBT3 224 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 OSGIN2Q9Y236 505 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 C5orf51A6NDU8 294 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 MPZP25189 248 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 TAS2R46P59540 309 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 DEFA6Q01524 100 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 NCMAPQ5T1S8 102 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 SEM1Q6ZVN7 128 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 CXorf67Q86X51 503 aaPredicted RBP11.61□□□□□ -0.55
VMP1-201ENST00000262291 ARRDC1Q8N5I2 433 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 CHMP1AQ9HD42 196 aaPredicted RBP11.61□□□□□ -0.55
VMP1-201ENST00000262291 ANXA10Q9UJ72 324 aa11.61□□□□□ -0.55
VMP1-201ENST00000262291 HEATR1Q9H583 2144 aaKnown RBP11.61□□□□□ -0.55
VMP1-201ENST00000262291 SNAPC5O75971 98 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 EIF2S3P41091 472 aaKnown RBP11.6□□□□□ -0.55
VMP1-201ENST00000262291 TGFBR3Q03167 851 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 C21orf62-AS1Q17RA5 79 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 ACTBL2Q562R1 376 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 CLEC18BQ6UXF7 455 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 Q6ZT83 130 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 RBMXL3Q8N7X1 1067 aaKnown RBP11.6□□□□□ -0.55
VMP1-201ENST00000262291 OR5M8Q8NGP6 311 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 NEK7Q8TDX7 302 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 ISOC2Q96AB3 205 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 CNTNAP3BQ96NU0 1288 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 PHB2Q99623 299 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 BSNQ9UPA5 3926 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 ICE1Q9Y2F5 2266 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 H0YL77 283 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 HS3ST1O14792 307 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 BCL2L11O43521 198 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 SMPD2O60906 423 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 PDCD6O75340 191 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 OR5H8P0DN80 308 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 PTGER4P35408 488 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 SERPINF1P36955 418 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 PPP1CBP62140 327 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 SUPT4H1P63272 117 aaKnown RBP11.6□□□□□ -0.55
VMP1-201ENST00000262291 ANKRD55Q3KP44 614 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 SLC25A40Q8TBP6 338 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 MITD1Q8WV92 249 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 OR5P3Q8WZ94 311 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 DCAF16Q9NXF7 216 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 PCNX1Q96RV3 2341 aa11.6□□□□□ -0.55
VMP1-201ENST00000262291 ZNF729A6NN14 1252 aaPredicted RBP11.59□□□□□ -0.55
VMP1-201ENST00000262291 AGPAT2O15120 278 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 CST4P01036 141 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 MPV17P39210 176 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 F2RL1P55085 397 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 CYB5R2Q6BCY4 276 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 LHFPL1Q86WI0 220 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 KCNRGQ8N5I3 272 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 OR1J1Q8NGS3 322 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 ZNF71Q9NQZ8 489 aaPredicted RBP11.59□□□□□ -0.55
VMP1-201ENST00000262291 UQCC1Q9NVA1 299 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 CARHSP1Q9Y2V2 147 aaKnown RBP11.59□□□□□ -0.55
VMP1-201ENST00000262291 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 A0A0D9SG52 128 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 TRAPPC2LH3BP13 241 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 IL2RAP01589 272 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 OR2B8PP59922 312 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 GUSBP1Q15486 140 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 WDR31Q8NA23 367 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 PPP1R1CQ8WVI7 109 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 RDH5Q92781 318 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 EXTL1Q92935 676 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
VMP1-201ENST00000262291 MYOZ1Q9NP98 299 aaPredicted RBP11.59□□□□□ -0.55
VMP1-201ENST00000262291 RNF222A6NCQ9 220 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms