RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ZCCHC14Q8WYQ9 949 aaKnown RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 SLC25A10Q9UBX3 287 aaPredicted RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 RAB5AP20339 215 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 RAB32Q13637 225 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 TMEM251Q8N6I4 163 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 ASCL3Q9NQ33 180 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 GLRX2Q9NS18 164 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 OR6C3Q9NZP0 311 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 ZNF629Q9UEG4 869 aaPredicted RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 EXOGQ9Y2C4 368 aaKnown RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 COL11A2P13942 1736 aaPredicted RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 C1QBP02746 253 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 SMIM4Q8WVI0 70 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 ZNF665Q9H7R5 613 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 BMI1P35226 326 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 MDH2P40926 338 aaKnown RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 GPR6P46095 362 aaPredicted RBP10.67□□□□□ -0.7
SPG11-201ENST00000261866 ZNF586Q9NXT0 402 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 NEU3Q9UQ49 428 aa10.67□□□□□ -0.7
SPG11-201ENST00000261866 IGFBP7Q16270 282 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 SSX1Q16384 188 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 FBXW9Q5XUX1 488 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 GGNBP1Q5YKI7 109 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 U3KQ87 197 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 A0A1B0GUH1 482 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 MIDNQ504T8 468 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 XAF1Q6GPH4 301 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 CXorf58Q96LI9 332 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 SRD5A3Q9H8P0 318 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 TMEM38BQ9NVV0 291 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 POLR2GP62487 172 aaKnown RBP eCLIP10.66□□□□□ -0.7
SPG11-201ENST00000261866 SLC23A3Q6PIS1 610 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 NUFIP2Q7Z417 695 aaKnown RBP10.66□□□□□ -0.7
SPG11-201ENST00000261866 MUC20Q8N307 709 aaPredicted RBP10.66□□□□□ -0.7
SPG11-201ENST00000261866 LINC01560Q8TB33 94 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 HMGCLL1Q8TB92 370 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 PRDM14Q9GZV8 571 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 TRPM6Q9BX84 2022 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 PHOX2AO14813 284 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 TGOLN2O43493 480 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 LIMS3P0CW19 117 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 LIMS4P0CW20 117 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 BRS3P32247 399 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 GUCA2BQ16661 112 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 IL22RA2Q969J5 263 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 GMPPAQ96IJ6 420 aaPredicted RBP10.66□□□□□ -0.7
SPG11-201ENST00000261866 P2RX4Q99571 388 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 ABCA3Q99758 1704 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 CSF2RBP32927 897 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 CDC20Q12834 499 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 FAM122BQ7Z309 247 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 TMEM204Q9BSN7 226 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 CCL28Q9NRJ3 127 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 OTOFQ9HC10 1997 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 ICE1Q9Y2F5 2266 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 A0A0J9YW62 118 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 A0A1W2PN81 502 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 OR4C46A6NHA9 309 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 GNG7O60262 68 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 GDF9O60383 454 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 CYB5R3P00387 301 aaPredicted RBP10.66□□□□□ -0.7
SPG11-201ENST00000261866 CD82P27701 267 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 CHRNA7P36544 502 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 ST3GAL2Q16842 350 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 ZNF826PQ6ZT77 177 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 UQCC2Q9BRT2 126 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 PRO1933Q9H354 126 aa10.66□□□□□ -0.7
SPG11-201ENST00000261866 PLPP2O43688 288 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 ADAP1O75689 374 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 ORM1P02763 201 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 OR2W3Q7Z3T1 314 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 GAPTQ8N292 157 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 ZNF485Q8NCK3 441 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 PIGMQ9H3S5 423 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 THSD7AQ9UPZ6 1657 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 PRSS44E7EML9 344 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 HTR1DP28221 377 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 CLEC2AQ6UVW9 174 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 BAP18Q8IXM2 172 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 C19orf43Q9BQ61 176 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 C9orf170A2RU37 121 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 OOEPA6NGQ2 149 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 CST2P09228 141 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 ENDOGQ14249 297 aaKnown RBP10.65□□□□□ -0.7
SPG11-201ENST00000261866 NOL4LQ96MY1 436 aaPredicted RBP10.65□□□□□ -0.7
SPG11-201ENST00000261866 F5P12259 2224 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 FAM87AP0C7U9 286 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 PPP1CCP36873 323 aaKnown RBP10.65□□□□□ -0.7
SPG11-201ENST00000261866 DYNLT3P51808 116 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 MMDQ15546 238 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 GRAMD2BQ96HH9 432 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 CISD1Q9NZ45 108 aaKnown RBP10.65□□□□□ -0.7
SPG11-201ENST00000261866 HELTA6NFD8 242 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 BGLAPP02818 100 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 ERVS71-1P61550 626 aa10.65□□□□□ -0.7
SPG11-201ENST00000261866 FDX2Q6P4F2 183 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms