RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ZXDAP98168 799 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 PRDX4Q13162 271 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 C3AR1Q16581 482 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 MPV17LQ2QL34 196 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 LHFPL1Q86WI0 220 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 CYB561D1Q8N8Q1 229 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 OR10D4PQ8NGN7 298 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 HLA-CQ95604 372 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 RPUSD4Q96CM3 377 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 GNPNAT1Q96EK6 184 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 PLPPR2Q96GM1 343 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 C1orf147Q96MC9 270 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 OR5B12Q96R08 314 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 TOLLIPQ9H0E2 274 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 SLC39A9Q9NUM3 307 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 PLA2G3Q9NZ20 509 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 CACFD1Q9UGQ2 172 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 TRBV6-7A0A0A0MS04 114 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 H3BQ15 152 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 AP4M1O00189 453 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 DEGS1O15121 323 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 ATXN7O15265 892 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 NXPH2O95156 264 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 IFNA1P01562 189 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 CFPP27918 469 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 IL2RGP31785 369 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 EIF2S3P41091 472 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 RAB1AP62820 205 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 DEFA6Q01524 100 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 TMEM187Q14656 261 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 MST1LQ2TV78 715 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 RNF212Q495C1 297 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 ACER2Q5QJU3 275 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 DCAF12Q5T6F0 453 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 ZNF787Q6DD87 383 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 OR2T2Q6IF00 324 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 ZNF343Q6P1L6 599 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 CALHM1Q8IU99 346 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 COMMD1Q8N668 190 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 TMEM252Q8N6L7 170 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 NUDT16L1Q9BRJ7 211 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 OR2H1Q9GZK4 316 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 FAM234AQ9H0X4 552 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 PNRC2Q9NPJ4 139 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 TMEM100Q9NV29 134 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 FBLN5Q9UBX5 448 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 HS3ST3B1Q9Y662 390 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 POMT1Q9Y6A1 747 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 C3orf80F5H4A9 247 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 DFFBO76075 338 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 SCAF4O95104 1147 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 LY86O95711 162 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 DANCRP0C864 163 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 NAT2P11245 290 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 RAC2P15153 192 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 BMP5P22003 454 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 CA6P23280 308 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 MPZP25189 248 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 RBM11P57052 281 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 UBE2NP61088 152 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 DLK1P80370 383 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 PMP22Q01453 160 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 SRSF4Q08170 494 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 CLN3Q13286 438 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 BTNL8Q6UX41 500 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 C17orf82Q86X59 251 aaPredicted RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 FAM89BQ8N5H3 189 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 OR1K1Q8NGR3 316 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 FRZBQ92765 325 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 APH1AQ96BI3 265 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 HINT2Q9BX68 163 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 OBP2BQ9NPH6 170 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 GPR27Q9NS67 375 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 GAR1Q9NY12 217 aaKnown RBP4.11□□□□□ -1.75
USP44-201ENST00000258499 KCNIP1Q9NZI2 227 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 CACNG5Q9UF02 275 aa4.11□□□□□ -1.75
USP44-201ENST00000258499 C2orf16Q68DN1 1984 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 NCOA6Q14686 2063 aaPredicted RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 A0A0G2JMM0 328 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 A0A1W2PPB8 328 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 A0A1W2PRS3 328 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 KIR3DP1A8MWS1 328 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 LINC00587B1AMM8 73 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 TOX3O15405 576 aaPredicted RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 KRASP01116 189 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 ACAA1P09110 424 aaPredicted RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 RFPL3SP0C7P2 107 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 HBG1P69891 147 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 HBG2P69892 147 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 S100A12P80511 92 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 HABP2Q14520 560 aaPredicted RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 PCOLCEQ15113 449 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 ZNF528Q3MIS6 628 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 CXorf67Q86X51 503 aaPredicted RBP4.1□□□□□ -1.75
USP44-201ENST00000258499 CCDC54Q8NEL0 328 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 OR2Y1Q8NGV0 311 aa4.1□□□□□ -1.75
USP44-201ENST00000258499 LHX4Q969G2 390 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms