RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 RCC2Q9P258 522 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 LPAR3Q9UBY5 353 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 TNRC6AQ8NDV7 1962 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 ABCA11PQ4W5N1 156 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 VWA1Q6PCB0 445 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 ZFP62Q8NB50 900 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 MYOZ1Q9NP98 299 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 C14orf166Q9Y224 244 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 ZZEF1O43149 2961 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 RNASEK-C17orf49H0YIS7 233 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 SCGNO76038 276 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 TFF1P04155 84 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 OR8U9P0C7N5 309 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 HABP2Q14520 560 aaPredicted RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 FAM76BQ5HYJ3 339 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 NCMAPQ5T1S8 102 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 RPUSD3Q6P087 351 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 FOXL2NBQ6ZUU3 175 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 OR8U1Q8NH10 309 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 EMG1Q92979 244 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 MARS2Q96GW9 593 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 SEC11CQ9BY50 192 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 UFSP2Q9NUQ7 469 aa12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 RCL1Q9Y2P8 373 aaKnown RBP12.59□□□□□ -0.39
TRAFD1-201ENST00000257604 IL18BPO95998 194 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 ZNF44P15621 663 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 FCGR2CP31995 323 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 FOXF2Q12947 444 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 VHLLQ6RSH7 139 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 ZDHHC22Q8N966 263 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 OR11L1Q8NGX0 322 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 SPSB1Q96BD6 273 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 Q96M66 194 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 OR2J1Q9GZK6 312 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 TMEM100Q9NV29 134 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 OR14J1Q9UGF5 321 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 COLCA2A8K830 154 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 ATXN7O15265 892 aaPredicted RBP12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 CFPP27918 469 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 FABP6P51161 128 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 LHFPL2Q6ZUX7 228 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 TMEM230Q96A57 120 aa12.58□□□□□ -0.4
TRAFD1-201ENST00000257604 CD300LBA8K4G0 201 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 XRCC2O43543 280 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 RHBDL1O75783 438 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 LY86O95711 162 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 FUT6P51993 359 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 FABP9Q0Z7S8 132 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 HNF4GQ14541 408 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 CD300LFQ8TDQ1 290 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 PTPRQQ9UMZ3 2332 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 A0A1W2PPH5 198 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 FABP1P07148 127 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 HLA-GP17693 338 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 FBXW9Q5XUX1 488 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 DHRS11Q6UWP2 260 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 LURAP1LQ8IV03 231 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 BSCL2Q96G97 398 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 TAF9BQ9HBM6 251 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 ASCL3Q9NQ33 180 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 SLC2A8Q9NY64 477 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 ANKRD30BLA7E2S9 258 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 TRAPPC2LH3BP13 241 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 ZNF14P17017 642 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 ZNF133P52736 654 aaPredicted RBP12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 RNPS1Q15287 305 aaKnown RBP12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 PDZD11Q5EBL8 140 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 Q6ZRG5 221 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 HOGA1Q86XE5 327 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 ZDHHC23Q8IYP9 409 aa12.57□□□□□ -0.4
TRAFD1-201ENST00000257604 DBX1A6NMT0 343 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 HOXC12P31275 282 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 WNT5AP41221 380 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 TMEM128Q5BJH2 165 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 FAM24BQ8N5W8 94 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 APOBEC3DQ96AK3 386 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 LIME1Q9H400 295 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 BCO1Q9HAY6 547 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 CDH20Q9HBT6 801 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 PLA2G2EQ9NZK7 142 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 GHRLQ9UBU3 117 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 PQLC2LA1A4F0 135 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 K7EM74 188 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 IGLV3-1P01715 115 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 CAV2P51636 162 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 TAS2R46P59540 309 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 RAB5BP61020 215 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 TCF15Q12870 199 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 C9orf152Q5JTZ5 239 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 C10orf91Q5T1B1 145 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 AADACL3Q5VUY0 350 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 PEG10Q86TG7 708 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 EIF5A2Q9GZV4 153 aaKnown RBP12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 ZNF71Q9NQZ8 489 aaPredicted RBP12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 ANXA10Q9UJ72 324 aa12.56□□□□□ -0.4
TRAFD1-201ENST00000257604 FIGNL2A6NMB9 653 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 SERPINE3A8MV23 424 aa12.55□□□□□ -0.4
TRAFD1-201ENST00000257604 S100A9P06702 114 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms