RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 ANKUB1A6NFN9 424 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 PATE3B3GLJ2 98 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 PITX3O75364 302 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 TMEM50AO95807 157 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 JOSD1Q15040 202 aaPredicted RBP12.77□□□□□ -0.36
MSI1-201ENST00000257552 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 SLC16A14Q7RTX9 510 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 THNSL2Q86YJ6 484 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 LRTM2Q8N967 370 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 OR5R1Q8NH85 324 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 ST8SIA1Q92185 356 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 LRFN1Q9P244 771 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 TP53TG5Q9Y2B4 290 aa12.77□□□□□ -0.36
MSI1-201ENST00000257552 URB1O60287 2271 aaKnown RBP12.77□□□□□ -0.37
MSI1-201ENST00000257552 ADAM20O43506 726 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 DHRS3O75911 302 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 ZNF133P52736 654 aaPredicted RBP12.77□□□□□ -0.37
MSI1-201ENST00000257552 CD81P60033 236 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 HERV-K104P61576 105 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 LPAL2Q16609 132 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 LYSMD4Q5XG99 296 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 RTL6Q6ICC9 239 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 ZNF695Q8IW36 515 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 OR2AE1Q8NHA4 323 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 ZNF665Q9H7R5 613 aa12.77□□□□□ -0.37
MSI1-201ENST00000257552 C3orf85A0A1B0GTC6 90 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 A0A1W2PQM1 296 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 MKRN2OSH3BPM6 223 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 MMP7P09237 267 aaPredicted RBP12.76□□□□□ -0.37
MSI1-201ENST00000257552 TLE4Q04727 773 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 C17orf67Q0P5P2 114 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 SLC25A47Q6Q0C1 308 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 NAT6Q93015 286 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 DDA1Q9BW61 102 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
MSI1-201ENST00000257552 KLRF1Q9NZS2 232 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 TRAF3IP2O43734 574 aaPredicted RBP12.76□□□□□ -0.37
MSI1-201ENST00000257552 OR2J2O76002 312 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 NUTF2P61970 127 aaKnown RBP12.76□□□□□ -0.37
MSI1-201ENST00000257552 GRB2P62993 217 aaKnown RBP12.76□□□□□ -0.37
MSI1-201ENST00000257552 CCL7P80098 99 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 FAM90A2PQ658T7 463 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 NDUFAF3Q9BU61 184 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 METTL9Q9H1A3 318 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 PRRC2CQ9Y520 2896 aaKnown RBP12.76□□□□□ -0.37
MSI1-201ENST00000257552 AHCTF1Q8WYP5 2266 aa12.76□□□□□ -0.37
MSI1-201ENST00000257552 TTC28Q96AY4 2481 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 NPIPB13A6NJU9 1138 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 NPIPB4C9JG80 1138 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 PNLIPP16233 465 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 COL10A1Q03692 680 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 NR2C1P13056 603 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 RNF4P78317 190 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 FOXO1Q12778 655 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 DNLZQ5SXM8 178 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 TMEM183AQ8IXX5 376 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 RBMXL1Q96E39 390 aaKnown RBP12.75□□□□□ -0.37
MSI1-201ENST00000257552 LYRM2Q9NU23 88 aaPredicted RBP12.75□□□□□ -0.37
MSI1-201ENST00000257552 A0A1B0GU03 582 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 LOC102723971A0A1B0GUV8 181 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 MPPED1O15442 326 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 CHST1O43916 411 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 CA11O75493 328 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 GUCA1AP43080 201 aaPredicted RBP12.75□□□□□ -0.37
MSI1-201ENST00000257552 CLN3Q13286 438 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 ODF3L1Q8IXM7 274 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 ZNF100Q8IYN0 542 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 ZNF441Q8N8Z8 693 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 GNPNAT1Q96EK6 184 aaPredicted RBP12.75□□□□□ -0.37
MSI1-201ENST00000257552 WFIKKN1Q96NZ8 548 aa12.75□□□□□ -0.37
MSI1-201ENST00000257552 XKRY2A2RUG3 117 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 TRDCB7Z8K6 153 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 SCRG1O75711 98 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 CYB5R3P00387 301 aaPredicted RBP12.74□□□□□ -0.37
MSI1-201ENST00000257552 ZNF41P51814 821 aaPredicted RBP12.74□□□□□ -0.37
MSI1-201ENST00000257552 CLDN17P56750 224 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 H3F3AP84243 136 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 P2RY6Q15077 328 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 HLA-BQ31612 363 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 LBHQ53QV2 105 aaPredicted RBP12.74□□□□□ -0.37
MSI1-201ENST00000257552 TCEAL6Q6IPX3 200 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 IL22RA1Q8N6P7 574 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 CLDN23Q96B33 292 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 PCED1AQ9H1Q7 454 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 DKKL1Q9UK85 242 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 DVL1O14640 695 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 IL18BPO95998 194 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 ERVS71-1P61550 626 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 MRPS34P82930 218 aaKnown RBP12.74□□□□□ -0.37
MSI1-201ENST00000257552 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 OR8G5Q8NG78 346 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 OR10A7Q8NGE5 316 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 PP6455Q8WZ26 134 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 MOB3AQ96BX8 217 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 RBM14Q96PK6 669 aaKnown RBP12.74□□□□□ -0.37
MSI1-201ENST00000257552 HIST1H2AAQ96QV6 131 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 RSG1Q9BU20 258 aa12.74□□□□□ -0.37
MSI1-201ENST00000257552 C11orf1Q9H5F2 150 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms