RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 KLK2P20151 261 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 TSPOP30536 169 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 FOXA1P55317 472 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 UCP2P55851 309 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 KIR2DS1Q14954 304 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OR1Q1Q15612 314 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 ATOH7Q8N100 152 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 C2orf73Q8N5S3 287 aaPredicted RBP5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OR8G5Q8NG78 346 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OR2Z1Q8NG97 314 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OR10G8Q8NGN5 311 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM3DQ96BQ1 224 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 RARRES2Q99969 163 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MAGT1Q9H0U3 335 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 B4GALT7Q9UBV7 327 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 A1L4Q6 167 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 TNFSF11O14788 317 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 FOXH1O75593 365 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 UBE2G1P62253 170 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 PPP1R1AQ13522 171 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 MEIG1Q5JSS6 88 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 ASPHD2Q6ICH7 369 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 BCDIN3DQ7Z5W3 292 aaKnown RBP5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 OR11G2Q8NGC1 345 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 NEIL1Q96FI4 390 aaPredicted RBP5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 SPANXDQ9BXN6 97 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 HRASLS2Q9NWW9 162 aa5.98□□□□□ -1.45
PDGFRA-201ENST00000257290 KIR2DS3K7RE56 304 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 GAS1P54826 345 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 TIAL1Q01085 375 aaKnown RBP eCLIP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 MESP2Q0VG99 397 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 KIR2DS3Q14952 304 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 C22orf39Q6P5X5 142 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 C20orf196Q8IYI0 205 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 SMIM8Q96KF7 97 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 WNT10AQ9GZT5 417 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 MRM2Q9UI43 246 aaKnown RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 PLPP2O43688 288 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 PSMB10P40306 273 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 ATP5J2P56134 94 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 FXYD4P59646 89 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 GAGE13Q4V321 117 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 LAIR1Q6GTX8 287 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 NUS1Q96E22 293 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 PERPQ96FX8 193 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 GRAMD2BQ96HH9 432 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 IMMP2LQ96T52 175 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 CDC14CA4D256 554 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 FAM24AA6NFZ4 105 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 BCAT2O15382 392 aaPredicted RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF737O75373 536 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 PPP1CAP62136 330 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 LRRC75BQ2VPJ9 315 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 BADQ92934 168 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 EMG1Q92979 244 aaKnown RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 SMG9Q9H0W8 520 aaKnown RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 PLEKHF2Q9H8W4 249 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 ARRDC5A6NEK1 342 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 UPK1AO00322 258 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 HLA-DRB1P01911 266 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 IFITM1P13164 125 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 CPMP14384 443 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 PSMB2P49721 201 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 MRGPRGQ86SM5 289 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 WFDC12Q8WWY7 111 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 COL4A5P29400 1685 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 A0A0G2JLM5 398 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 B9A039 149 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 PPIHO43447 177 aaKnown RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 MTCP1P56278 107 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 TMEM176BQ3YBM2 270 aaPredicted RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 VAX1Q5SQQ9 334 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 MRPL30Q8TCC3 161 aaKnown RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF480Q8WV37 535 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC6A18Q96N87 628 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 WDR83Q9BRX9 315 aaKnown RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 VN1R3Q9BXE9 311 aa5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.97□□□□□ -1.45
PDGFRA-201ENST00000257290 TBX6O95947 436 aaPredicted RBP5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 TIA1P31483 386 aaKnown RBP eCLIP5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 SRSF3P84103 164 aaKnown RBP5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 ZNF85Q03923 595 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 ADAMTSL5Q6ZMM2 481 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 SLC36A1Q7Z2H8 476 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 MRAPQ8TCY5 172 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 FBLIM1Q8WUP2 373 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 IGSF8Q969P0 613 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 LRRC61Q9BV99 259 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 MED20Q9H944 212 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 ELOVL3Q9HB03 270 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 HDGFL3Q9Y3E1 203 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 TRBV4-1A0A0J9YWV2 114 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 ANKRD66B4E2M5 251 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 CCL22O00626 93 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 NDUFC2O95298 119 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 ZIC2O95409 532 aaPredicted RBP5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 CAMPP49913 170 aa5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 PITX1P78337 314 aaPredicted RBP5.96□□□□□ -1.45
PDGFRA-201ENST00000257290 PDCD1LG2Q9BQ51 273 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms