RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 LYSMD2Q8IV50 215 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 OR8U1Q8NH10 309 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 RNF141Q8WVD5 230 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 LHX4Q969G2 390 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 CNTD2Q9H8S5 307 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 CHST2Q9Y4C5 530 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 SMAD7O15105 426 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 CTSDP07339 412 aaPredicted RBP11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 CCL2P13500 99 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 CLDN18P56856 261 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 DGAT2L6Q6ZPD8 337 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 BCDIN3DQ7Z5W3 292 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 OR5AP2Q8NGF4 316 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 TMUB1Q9BVT8 246 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 MLXQ9UH92 298 aa11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 MRM2Q9UI43 246 aaKnown RBP11.64□□□□□ -0.55
PRPF38A-201ENST00000257181 SYNGR1O43759 233 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 S100A11P31949 105 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 APH1BQ8WW43 257 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 SRXN1Q9BYN0 137 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 CYB5R1Q9UHQ9 305 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 SMLR1H3BR10 107 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 ARPC5O15511 151 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 SIAH2O43255 324 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 KLF7O75840 302 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 ZIC2O95409 532 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 HPRT1P00492 218 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 LHX2P50458 406 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 ZNF385CQ66K41 422 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 OR8G2PQ6IF36 304 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 SMIM4Q8WVI0 70 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 MISP3Q96FF7 219 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 TOX4O94842 621 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 GALR1P47211 349 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 CNN1P51911 297 aaKnown RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 BSPH1Q075Z2 132 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 PHYHD1Q5SRE7 291 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 R3HDM4Q96D70 268 aa11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 KLF2Q9Y5W3 355 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 MBD3L4A6NDZ8 208 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 MBD3L3A6NE82 208 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 MBD3L5A6NJ08 208 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 RBM11P57052 281 aaKnown RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 RELQ04864 619 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 MBD3L2Q8NHZ7 208 aaPredicted RBP11.63□□□□□ -0.55
PRPF38A-201ENST00000257181 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 POLR2IP36954 125 aaKnown RBP11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 DMKNQ6E0U4 476 aaPredicted RBP11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 PRSS22Q9GZN4 317 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 IGKV3D-15A0A087WSY6 115 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 IL5P05113 134 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 ZNF816Q0VGE8 651 aaPredicted RBP11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 SPANXN5Q5MJ07 72 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 MDS2Q8NDY4 140 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 ANK1P16157 1881 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 UMAD1C9J7I0 102 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 TRAF3IP2O43734 574 aaPredicted RBP11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 GYPAP02724 150 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 GLI4P10075 376 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 HRH1P35367 487 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 IL24Q13007 206 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 HYAL4Q2M3T9 481 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 OR10A7Q8NGE5 316 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 MEGF10Q96KG7 1140 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 LURAP1Q96LR2 239 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 HARBI1Q96MB7 349 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 DKK4Q9UBT3 224 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 RFPL4AA6NLU0 287 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 OOSP1A8MZH6 123 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 RFPL4AL1F8VTS6 287 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 USF1P22415 310 aaPredicted RBP11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 LSAMPQ13449 338 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 OPN4Q9UHM6 478 aa11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 LSM2Q9Y333 95 aaKnown RBP11.62□□□□□ -0.55
PRPF38A-201ENST00000257181 TMEM272A0A1B0GTI8 110 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 C17orf100A8MU93 164 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 IQCF6A8MYZ5 107 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 ANKRD55Q3KP44 614 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 CENPVQ7Z7K6 275 aaPredicted RBP11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 SLC51BQ86UW2 128 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 NRIP2Q9BQI9 281 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 PEMTQ9UBM1 199 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 OR2W1Q9Y3N9 320 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 A6NIN4 97 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 CLN5O75503 358 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 PPOXP50336 477 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 FLI1Q01543 452 aaPredicted RBP11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 TCF15Q12870 199 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 ASAH1Q13510 395 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 ZG16BQ96DA0 208 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 MSL2Q9HCI7 577 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 RPH3ALQ9UNE2 315 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 LCTP09848 1927 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 C3orf85A0A1B0GTC6 90 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 ZNF705EA8MWA4 302 aaPredicted RBP11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 B4DSR2 109 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 CSRP3P50461 194 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 ZAR1Q86SH2 424 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 TNFRSF14Q92956 283 aa11.61□□□□□ -0.55
PRPF38A-201ENST00000257181 ABHD1Q96SE0 405 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms