RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 FOLR2P14207 255 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR10V1Q8NGI7 309 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 MYOZ3Q8TDC0 251 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 PMCHL2Q9BQD1 86 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZNF430Q9H8G1 570 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 A8MXK9 166 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 ALOX12BO75342 701 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 LEPROTL1O95214 131 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 ORM1P02763 201 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 SP1P08047 785 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 ARR3P36575 388 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 WDR25Q64LD2 544 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 RABEPKQ7Z6M1 372 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 MOGAT1Q96PD6 335 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM204Q9BSN7 226 aa11.66□□□□□ -0.54
PCDHGA3-201ENST00000253812 SRSF10O75494 262 aaKnown RBP11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 CD40P25942 277 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 DMRTC1Q5HYR2 192 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR2Y1Q8NGV0 311 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 ZNF707Q96C28 371 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 PRR13Q9NZ81 148 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 DHCR7Q9UBM7 475 aaKnown RBP11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR4C46A6NHA9 309 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 M0R3E3 92 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 SLC17A3O00476 420 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 CD46P15529 392 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 PSG5Q15238 335 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 FNDC7Q5VTL7 733 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM91Q6ZNR0 172 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 C16orf52Q8NHV5 167 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 P2RX4Q99571 388 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 MMP25Q9NPA2 562 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM140Q9NV12 185 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 AREGP15514 252 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 EMDP50402 254 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 MEF2BQ02080 365 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 C8orf82Q6P1X6 216 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 PDPNQ86YL7 162 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 OR11G2Q8NGC1 345 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 MAFAQ8NHW3 353 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 TMEM70Q9BUB7 260 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 CARHSP1Q9Y2V2 147 aaKnown RBP11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 ATRXP46100 2492 aa11.65□□□□□ -0.54
PCDHGA3-201ENST00000253812 TRBV5-4A0A0C4DH59 114 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 DHRS7CA6NNS2 312 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 H0YL77 283 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 ANKRD34CP0C6C1 535 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 VSIG10L2P0DP72 767 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 Q8IYB0 196 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 TTC3P53804 2025 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 A0A1W2PNR3 127 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 G3V3Y1 287 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 LMX1BO60663 402 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 PITX3O75364 302 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 HLA-DRB1P01911 266 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 HIST1H1BP16401 226 aaKnown RBP11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 DCDP81605 110 aaKnown RBP11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 TMEM215Q68D42 235 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 LURAP1LQ8IV03 231 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 TUBD1Q9UJT1 453 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 MOSPD3O75425 235 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 CXorf1O96002 111 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 CDKN3Q16667 212 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 ZNF506Q5JVG8 444 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 TMEM136Q6ZRR5 245 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 SCRG1O75711 98 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 DHRS3O75911 302 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 HOXA5P20719 270 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 TMEM52BQ4KMG9 183 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 OR8B3Q8NGG8 313 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 MOB3AQ96BX8 217 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 AURKAIP1Q9NWT8 199 aaPredicted RBP11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 SCN1AP35498 2009 aa11.64□□□□□ -0.55
PCDHGA3-201ENST00000253812 A0A1B0GTH9 108 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 GLIPR1P48060 266 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 AGFG1P52594 562 aaKnown RBP11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 TBC1D26Q86UD7 250 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 OR4P4Q8NGL7 312 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 MRGPRX4Q96LA9 322 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 MRPL37Q9BZE1 423 aaKnown RBP11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 FGF21Q9NSA1 209 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 IGHV3-9P01782 118 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 NPY1RP25929 384 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 CEACAM6P40199 344 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 KLF3P57682 345 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 EGLN1Q9GZT9 426 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 CLDN16Q9Y5I7 305 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 BCAT2O15382 392 aaPredicted RBP11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 CRYAAP02489 173 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 KLK2P20151 261 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 OPRK1P41145 380 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 SMIM21Q3B7S5 101 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 TSPO2Q5TGU0 170 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 DOLPP1Q86YN1 238 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 LOXHD1Q8IVV2 1947 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 M0R296 226 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 HPRT1P00492 218 aa11.63□□□□□ -0.55
PCDHGA3-201ENST00000253812 EPHA8P29322 1005 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms