RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 SLITRK2Q9H156 845 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 VCX3BQ9H321 246 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 DUSP21Q9H596 190 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 TAS2R3Q9NYW6 316 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 ST3GAL6Q9Y274 331 aa18.58■□□□□ 0.56
LSM4-201ENST00000252816 H0YHG0 523 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 MAS1P04201 325 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 SERPINA2P20848 420 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 CDK2P24941 298 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 RBM11P57052 281 aaKnown RBP18.57■□□□□ 0.56
LSM4-201ENST00000252816 SRSF4Q08170 494 aaKnown RBP18.57■□□□□ 0.56
LSM4-201ENST00000252816 SPHARQ15513 63 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 SLC22A6Q4U2R8 563 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 PLA1AQ53H76 456 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 NHLRC3Q5JS37 347 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 HEPN1Q6WQI6 88 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 OSR2Q8N2R0 312 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 MUL1Q969V5 352 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 CLEC7AQ9BXN2 247 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 GAL3ST2Q9H3Q3 398 aa18.57■□□□□ 0.56
LSM4-201ENST00000252816 TRRAPQ9Y4A5 3859 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 VGLL3A8MV65 326 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 GEMIN2O14893 280 aaKnown RBP18.56■□□□□ 0.56
LSM4-201ENST00000252816 CSTBP04080 98 aaKnown RBP18.56■□□□□ 0.56
LSM4-201ENST00000252816 SSX2Q16385 188 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 C17orf58Q2M2W7 97 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 LYPD6Q86Y78 171 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 JAGN1Q8N5M9 183 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 SGMS2Q8NHU3 365 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 PLPPR1Q8TBJ4 325 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 FOXRED1Q96CU9 486 aaPredicted RBP18.56■□□□□ 0.56
LSM4-201ENST00000252816 MALSU1Q96EH3 234 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 S100A13Q99584 98 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 KIF25Q9UIL4 384 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 TPRKBQ9Y3C4 175 aa18.56■□□□□ 0.56
LSM4-201ENST00000252816 MEGF11A6BM72 1044 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 FAM172BPA6NC97 362 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 TSPAN9O75954 239 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 RAB13P51153 203 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 GP2P55259 537 aaKnown RBP18.55■□□□□ 0.56
LSM4-201ENST00000252816 MED22Q15528 200 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 FAM27D1Q5T7N8 215 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 RSBN1Q5VWQ0 802 aaPredicted RBP18.55■□□□□ 0.56
LSM4-201ENST00000252816 UNQ9370/PRO34162Q6UXP9 181 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 SUMF2Q8NBJ7 301 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 OR13A1Q8NGR1 328 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 TMED9Q9BVK6 235 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 DPCDQ9BVM2 203 aaPredicted RBP18.55■□□□□ 0.56
LSM4-201ENST00000252816 IFT22Q9H7X7 185 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 OR6C3Q9NZP0 311 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 MRPS28Q9Y2Q9 187 aaKnown RBP18.55■□□□□ 0.56
LSM4-201ENST00000252816 RNF114Q9Y508 228 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 PKD1L1Q8TDX9 2849 aa18.55■□□□□ 0.56
LSM4-201ENST00000252816 MEIKINA0A087WXM9 373 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 ZNF780AO75290 641 aaPredicted RBP18.54■□□□□ 0.56
LSM4-201ENST00000252816 OR7C1O76099 320 aaPredicted RBP18.54■□□□□ 0.56
LSM4-201ENST00000252816 CGB3P0DN86 165 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 CGB7P0DN87 165 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 JUNBP17275 347 aaPredicted RBP18.54■□□□□ 0.56
LSM4-201ENST00000252816 CRHBPP24387 322 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 KRTAP10-3P60369 221 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 FAM189A2Q15884 450 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 ACSM3Q53FZ2 586 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 UTF1Q5T230 341 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 MINOS1Q5TGZ0 78 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 GLIPR1L1Q6UWM5 242 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 CDH26Q8IXH8 852 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 ABHD12Q8N2K0 398 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 OR4D6Q8NGJ1 314 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 OR4P4Q8NGL7 312 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 BARHL1Q9BZE3 327 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 NCOR1P1Q9H4R4 102 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 C16orf95Q9H693 158 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 MINOS1-NBL1R4GNA1 71 aa18.54■□□□□ 0.56
LSM4-201ENST00000252816 ZNF729A6NN14 1252 aaPredicted RBP18.53■□□□□ 0.56
LSM4-201ENST00000252816 RGS10O43665 173 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 CHST1O43916 411 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 ATP6V1G2O95670 118 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 GTF2F2P13984 249 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 MAPK3P27361 379 aaPredicted RBP18.53■□□□□ 0.56
LSM4-201ENST00000252816 GLP1RP43220 463 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 KCNJ3P48549 501 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 HSPA13P48723 471 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 PROK1P58294 105 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 PAX5Q02548 391 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 SLC35E4Q6ICL7 350 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 OR52W1Q6IF63 320 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 MS4A15Q8N5U1 240 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 NDNFQ8TB73 568 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 THRSPQ92748 146 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 ZNF286AQ9HBT8 521 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 HILPDAQ9Y5L2 63 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 MGAM2Q2M2H8 2515 aa18.53■□□□□ 0.56
LSM4-201ENST00000252816 KBTBD11-OT1A0A1B0GTJ5 212 aa18.52■□□□□ 0.56
LSM4-201ENST00000252816 CD34P28906 385 aa18.52■□□□□ 0.56
LSM4-201ENST00000252816 MPV17LQ2QL34 196 aa18.52■□□□□ 0.56
LSM4-201ENST00000252816 AWAT2Q6E213 333 aa18.52■□□□□ 0.56
LSM4-201ENST00000252816 LINC00596Q86U02 117 aa18.52■□□□□ 0.56
LSM4-201ENST00000252816 CNBD2Q96M20 576 aa18.52■□□□□ 0.56
LSM4-201ENST00000252816 PCDHB16Q9NRJ7 776 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms