RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 FAM172BPA6NC97 362 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 SH2D7A6NKC9 451 aaPredicted RBP8.18□□□□□ -1.1
VPS50-201ENST00000251739 M0QZK8 103 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 SH2D1BO14796 132 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 MPIG6BO95866 241 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 LPLP06858 475 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 ZNF20P17024 532 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 PTGFRP43088 359 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 PAX5Q02548 391 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 CENPVQ7Z7K6 275 aaPredicted RBP8.18□□□□□ -1.1
VPS50-201ENST00000251739 OSR2Q8N2R0 312 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 LINC00482Q8N8I6 264 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 OR4X2Q8NGF9 303 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 OR51T1Q8NGJ9 327 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 OR5D18Q8NGL1 313 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 OR13C9Q8NGT0 318 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 BCAS4Q8TDM0 211 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 TRUB1Q8WWH5 349 aaKnown RBP8.18□□□□□ -1.1
VPS50-201ENST00000251739 RFT1Q96AA3 541 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 CREB3L1Q96BA8 519 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 CENPNQ96H22 339 aaPredicted RBP8.18□□□□□ -1.1
VPS50-201ENST00000251739 EAF1Q96JC9 268 aaPredicted RBP8.18□□□□□ -1.1
VPS50-201ENST00000251739 HRASLS5Q96KN8 279 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 SPACA5Q96QH8 159 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 PPIL3Q9H2H8 161 aaKnown RBP8.18□□□□□ -1.1
VPS50-201ENST00000251739 RIBC2Q9H4K1 309 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 NCOR1P1Q9H4R4 102 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 GLS2Q9UI32 602 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 PCDHGB5Q9Y5G0 923 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 DNAH7Q8WXX0 4024 aa8.18□□□□□ -1.1
VPS50-201ENST00000251739 A0A1W2PPI3 338 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 WI2-2373I1.2A0A1W2PRP0 233 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 ZNF729A6NN14 1252 aaPredicted RBP8.17□□□□□ -1.1
VPS50-201ENST00000251739 H3BUI4 141 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 DUS4LO95620 317 aaKnown RBP8.17□□□□□ -1.1
VPS50-201ENST00000251739 ALPLP05186 524 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 ATP6V1E1P36543 226 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 CEACAM3P40198 252 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 ARHGDIBP52566 201 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 SNRPGP62308 76 aaKnown RBP8.17□□□□□ -1.1
VPS50-201ENST00000251739 ATXN7L3Q14CW9 347 aaPredicted RBP8.17□□□□□ -1.1
VPS50-201ENST00000251739 ELP2Q6IA86 826 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 CCDC144NLQ6NUI1 221 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 THNSL2Q86YJ6 484 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 ZNF649Q9BS31 505 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 FAM53CQ9NYF3 392 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 MYRFQ9Y2G1 1151 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 MOB4Q9Y3A3 225 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 HSPE1-MOB4S4R3N1 261 aa8.17□□□□□ -1.1
VPS50-201ENST00000251739 KBTBD11-OT1A0A1B0GTJ5 212 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 H0YHG0 523 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 HTR1AP08908 422 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 ZNF44P15621 663 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 GABRB1P18505 474 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 MTNR1BP49286 362 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 KRBOX4Q5JUW0 171 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 VAX1Q5SQQ9 334 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 C11orf87Q6NUJ2 197 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 ZNF529Q6P280 563 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 PARP16Q8N5Y8 322 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 ACBD7Q8N6N7 88 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 Q8NFD4 153 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 OR4D6Q8NGJ1 314 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 OR13A1Q8NGR1 328 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 OR13C3Q8NGS6 347 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 OR9G1Q8NH87 305 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 CAPSLQ8WWF8 208 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 RNFT2Q96EX2 444 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 ZCCHC4Q9H5U6 513 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 OR6C3Q9NZP0 311 aa8.16□□□□□ -1.1
VPS50-201ENST00000251739 EXOGQ9Y2C4 368 aaKnown RBP8.16□□□□□ -1.1
VPS50-201ENST00000251739 TRAV24A0A0B4J272 114 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 DAPL1A0PJW8 107 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 PSMB11A5LHX3 300 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 SAC3D1A6NKF1 404 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 J3QR06 171 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 TOR1AO14656 332 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 SULT1B1O43704 296 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 ZFPL1O95159 310 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 IL1AP01583 271 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 MNDAP41218 407 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 OR3A4PP47883 348 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 PRRX1P54821 245 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 RPL23AP62750 156 aaKnown RBP8.15□□□□□ -1.1
VPS50-201ENST00000251739 ALKBH1Q13686 389 aaKnown RBP8.15□□□□□ -1.1
VPS50-201ENST00000251739 KPNB1Q14974 876 aaKnown RBP8.15□□□□□ -1.1
VPS50-201ENST00000251739 KISS1Q15726 138 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 C1orf146Q5VVC0 180 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 RSBN1Q5VWQ0 802 aaPredicted RBP8.15□□□□□ -1.1
VPS50-201ENST00000251739 MEDAGQ5VYS4 303 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 SYS1Q8N2H4 156 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 C5orf56Q8N8D9 126 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 PXT1Q8NFP0 134 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 OR56B4Q8NH76 319 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 STMN2Q93045 179 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 TOMM40LQ969M1 308 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 LGALS12Q96DT0 336 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 C4orf36Q96KX1 117 aa8.15□□□□□ -1.1
VPS50-201ENST00000251739 P2RX4Q99571 388 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms