RNA–Protein interactions for RNA: ENST00000251722.10

USP40-201, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP40, Length 5,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-201ENST00000251722 LYZL6O75951 148 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 ARG1P05089 322 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 WDR38Q5JTN6 314 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 DOLPP1Q86YN1 238 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 PRR7Q8TB68 274 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 ERGIC1Q969X5 290 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 GPA33Q99795 319 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 CBLN4Q9NTU7 201 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 TESK1Q15569 626 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 ATP5SQ99766 215 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 SAP30LQ9HAJ7 183 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 GPR35Q9HC97 309 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 MTCH1Q9NZJ7 389 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 PAM16Q9Y3D7 125 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 SPINT1O43278 529 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 ERGP11308 486 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 NIT1Q86X76 327 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 LDLRAD3Q86YD5 345 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 OR10V1Q8NGI7 309 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 OR4S2Q8NH73 311 aa11.26□□□□□ -0.61
USP40-201ENST00000251722 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 ADAM20O43506 726 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 GOSR1O95249 250 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 PMCHP20382 165 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 CTSSP25774 331 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 CCL17Q92583 94 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 TMEM191AQ9H0A3 160 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 AUNIPQ9H7T9 357 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 RAB18Q9NP72 206 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 WASHC3Q9Y3C0 194 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 ANKRD31Q8N7Z5 1873 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 LANCL1O43813 399 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 SNCGO76070 127 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 NDUFB6O95139 128 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 CT62P0C5K7 136 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 WNT2BQ93097 391 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 ANGPTL4Q9BY76 406 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 TTTY12Q9BZ98 90 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 CLEC18AA5D8T8 446 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 J3QT63 122 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 SPRY1O43609 319 aaPredicted RBP11.25□□□□□ -0.61
USP40-201ENST00000251722 PSG6Q00889 435 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 GAMTQ14353 236 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 LRP11Q86VZ4 500 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 CLEC18CQ8NCF0 446 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 GPR32P1Q8NGA4 272 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 OR4F17Q8NGA8 305 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 OR1L4Q8NGR5 311 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 OR4F5Q8NH21 305 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 OR4F4Q96R69 305 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 IGHV1-45A0A0A0MS14 117 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 R3HDM4Q96D70 268 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 ZMIZ1Q9ULJ6 1067 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 NEU3Q9UQ49 428 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 BRWD3Q6RI45 1802 aa11.25□□□□□ -0.61
USP40-201ENST00000251722 OR4A8P0C604 315 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 HIST1H1BP16401 226 aaKnown RBP11.24□□□□□ -0.61
USP40-201ENST00000251722 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
USP40-201ENST00000251722 SLC25A30Q5SVS4 291 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 OR52L2PQ8NGH6 319 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 OR5A2Q8NGI9 324 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 PARP12Q9H0J9 701 aaKnown RBP11.24□□□□□ -0.61
USP40-201ENST00000251722 ADGRL4Q9HBW9 690 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 FAM206AQ9NX38 181 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 NPTNQ9Y639 398 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 PDE4DIPQ5VU43 2346 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 SSSCA1O60232 199 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 IFITM3Q01628 133 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 PRSS45Q7RTY3 260 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 OR5R1Q8NH85 324 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 ZNF721Q8TF20 911 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 FAAP24Q9BTP7 215 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 OR2H1Q9GZK4 316 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 F2RL2O00254 374 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 FABP2P12104 132 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 FCER1GP30273 86 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 ZNF787Q6DD87 383 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 C20orf196Q8IYI0 205 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 TMEM123Q8N131 208 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 UBE2FQ969M7 185 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 PLA2G12AQ9BZM1 189 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 TMEM38BQ9NVV0 291 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 RER1O15258 196 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 NDUFA2O43678 99 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 SHISA5Q8N114 240 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 DUXBA0A1W2PPF3 345 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 SHISA8B8ZZ34 492 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 RHBDL1O75783 438 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 CEACAM6P40199 344 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 LGALS7P47929 136 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 ZNF345Q14585 488 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 GPNMBQ14956 572 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 Q56UQ5 140 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 RPL7L1Q6DKI1 246 aaKnown RBP11.24□□□□□ -0.61
USP40-201ENST00000251722 TNFRSF14Q92956 283 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 ANAPC16Q96DE5 110 aa11.24□□□□□ -0.61
USP40-201ENST00000251722 A0A1W2PNV4 684 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms