RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 MPZL2O60487 215 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 OR2F2O95006 317 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 FADS2O95864 444 aaKnown RBP16.83■□□□□ 0.28
NEDD8-201ENST00000250495 GDNFP39905 211 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 MNDAP41218 407 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 MTNR1BP49286 362 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 CCDC144NLQ6NUI1 221 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 PARP16Q8N5Y8 322 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 ZNF565Q8N9K5 539 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 MRAPQ8TCY5 172 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 COQ2Q96H96 371 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 INPP5EQ9NRR6 644 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 AASSQ9UDR5 926 aa16.83■□□□□ 0.28
NEDD8-201ENST00000250495 A0A1W2PRX2 142 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 TMEM212A6NML5 194 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 CCDC159P0C7I6 412 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 PF4V1P10720 104 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 GABRB1P18505 474 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 CD33P20138 364 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 LOXL3P58215 753 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 ZP1P60852 638 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 ATXN7L3Q14CW9 347 aaPredicted RBP16.82■□□□□ 0.28
NEDD8-201ENST00000250495 CDK5R1Q15078 307 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 ABCA11PQ4W5N1 156 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 TPTE2P1Q5T6R2 138 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 CBR4Q8N4T8 237 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 OR5AK2Q8NH90 309 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 CPNE2Q96FN4 548 aaPredicted RBP16.82■□□□□ 0.28
NEDD8-201ENST00000250495 ISG20L2Q9H9L3 353 aaKnown RBP16.82■□□□□ 0.28
NEDD8-201ENST00000250495 DHDHQ9UQ10 334 aa16.82■□□□□ 0.28
NEDD8-201ENST00000250495 TSSC4Q9Y5U2 329 aaPredicted RBP16.82■□□□□ 0.28
NEDD8-201ENST00000250495 KBTBD11-OT1A0A1B0GTJ5 212 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 TCRBV4S1A1TA0A5B7 111 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 LY6LH3BQJ8 138 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 M0QZK8 103 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 MAGEB3O15480 346 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 ZFPL1O95159 310 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 LPLP06858 475 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 GBX2P52951 348 aaPredicted RBP16.81■□□□□ 0.28
NEDD8-201ENST00000250495 C17orf58Q2M2W7 97 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 ZNF691Q5VV52 312 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 ELP2Q6IA86 826 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 PXT1Q8NFP0 134 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 OR51T1Q8NGJ9 327 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 OR9G1Q8NH87 305 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 HAVCR2Q8TDQ0 301 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 PHF21AQ96BD5 680 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 BARHL1Q9BZE3 327 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 NCOR1P1Q9H4R4 102 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 ERVK13-1Q9NX77 482 aa16.81■□□□□ 0.28
NEDD8-201ENST00000250495 FAM106CPP0CH98 169 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 NFYBP25208 207 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 C21orf33P30042 268 aaPredicted RBP16.8■□□□□ 0.28
NEDD8-201ENST00000250495 OR3A4PP47883 348 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 RAB40BQ12829 278 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 RBM39Q14498 530 aaKnown RBP16.8■□□□□ 0.28
NEDD8-201ENST00000250495 OR4X2Q8NGF9 303 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 RHOXF1Q8NHV9 184 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 TSEN15Q8WW01 171 aaKnown RBP16.8■□□□□ 0.28
NEDD8-201ENST00000250495 SLC29A1Q99808 456 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 PPIL3Q9H2H8 161 aaKnown RBP16.8■□□□□ 0.28
NEDD8-201ENST00000250495 AMBNQ9NP70 447 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 PCDHB16Q9NRJ7 776 aa16.8■□□□□ 0.28
NEDD8-201ENST00000250495 A6NHS1 94 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 CGB3P0DN86 165 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 CGB7P0DN87 165 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 RAB3AP20336 220 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 PAN3Q58A45 887 aaKnown RBP16.79■□□□□ 0.28
NEDD8-201ENST00000250495 THNSL2Q86YJ6 484 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 CNIH3Q8TBE1 160 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 KIRREL1Q96J84 757 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 RDH12Q96NR8 316 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 GPER1Q99527 375 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 PDCD1LG2Q9BQ51 273 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 ZNF649Q9BS31 505 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 ANKRD60Q9BZ19 345 aa16.79■□□□□ 0.28
NEDD8-201ENST00000250495 AURKAIP1Q9NWT8 199 aaPredicted RBP16.79■□□□□ 0.28
NEDD8-201ENST00000250495 RPL36Q9Y3U8 105 aaKnown RBP16.79■□□□□ 0.28
NEDD8-201ENST00000250495 AMMECR1Q9Y4X0 333 aaPredicted RBP16.79■□□□□ 0.28
NEDD8-201ENST00000250495 MEIKINA0A087WXM9 373 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 E9PI62 339 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 PF4P02776 101 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 IL13RA2Q14627 380 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 KLHL22Q53GT1 634 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 TCTEX1D4Q5JR98 221 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 C9orf152Q5JTZ5 239 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 FOXB2Q5VYV0 432 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 SATL1Q86VE3 508 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 MYDGFQ969H8 173 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 RPEQ96AT9 228 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 KIF25Q9UIL4 384 aa16.78■□□□□ 0.28
NEDD8-201ENST00000250495 LOC100130705A0A1B0GUX0 176 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 J3QR06 171 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 HSPB6O14558 160 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 TNFAIP8O95379 198 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 AMY1AP04745 511 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 AMY2AP04746 511 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 IGLL1P15814 213 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 GLP1RP43220 463 aa16.77■□□□□ 0.28
NEDD8-201ENST00000250495 KCNJ3P48549 501 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms