RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 TRDCB7Z8K6 153 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 AQP7O14520 342 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 MPPED1O15442 326 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 AGFG2O95081 481 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 RPL12P30050 165 aaKnown RBP18.46■□□□□ 0.55
CLN6-201ENST00000249806 RPL7L1Q6DKI1 246 aaKnown RBP18.46■□□□□ 0.55
CLN6-201ENST00000249806 SLC25A40Q8TBP6 338 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 MRPL30Q8TCC3 161 aaKnown RBP18.46■□□□□ 0.55
CLN6-201ENST00000249806 PRRX2Q99811 253 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 PKIBQ9C010 78 aa18.46■□□□□ 0.55
CLN6-201ENST00000249806 IGKV1D-13A0A0B4J2D9 117 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 K7EPK0 472 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 SIGLEC5O15389 551 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 FGF16O43320 207 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 IGKV1-13P0DP09 117 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 RCC1P18754 421 aaPredicted RBP18.45■□□□□ 0.54
CLN6-201ENST00000249806 KCNJ3P48549 501 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 FOXF2Q12947 444 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 SPIN3Q5JUX0 258 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 LGI3Q8N145 548 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 FAM71E2Q8N5Q1 922 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 CCDC71LQ8N9Z2 235 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 OR52M1Q8NGK5 317 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 MS4A7Q9GZW8 240 aaPredicted RBP18.45■□□□□ 0.54
CLN6-201ENST00000249806 ASF1BQ9NVP2 202 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 GTF3C1Q12789 2109 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 C3orf85A0A1B0GTC6 90 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 H7C1Q1 480 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 SLC34A2O95436 690 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 UCP2P55851 309 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 TCF15Q12870 199 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 SMCO1Q147U7 214 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 CLEC9AQ6UXN8 241 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 ZNF818PQ6ZRF7 136 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 SCCPDHQ8NBX0 429 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 OR1J1Q8NGS3 322 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 DLL3Q9NYJ7 618 aa18.45■□□□□ 0.54
CLN6-201ENST00000249806 J3QT63 122 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 ZNF44P15621 663 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 LINC00596Q86U02 117 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 SLC35G3Q8N808 338 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 SPERTQ8NA61 448 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 TAAR6Q96RI8 345 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 RTL8AQ9BWD3 113 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 SPACA1Q9HBV2 294 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 AKAP13Q12802 2813 aa18.44■□□□□ 0.54
CLN6-201ENST00000249806 KIR2DS1A0A191URI9 304 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 FAM157CP0CG43 387 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 SELEP16581 610 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 M6PRP20645 277 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 KIR2DS4P43632 304 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 PSG7Q13046 419 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 KIR2DS1Q14954 304 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 FAM76BQ5HYJ3 339 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 TBC1D26Q86UD7 250 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 GAPTQ8N292 157 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 SARAFQ96BY9 339 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 CACNA1GO43497 2377 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 TMEM268Q5VZI3 342 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 INO80CQ6PI98 192 aaPredicted RBP18.43■□□□□ 0.54
CLN6-201ENST00000249806 LDLRAD3Q86YD5 345 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 CCDC36Q8IYA8 594 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 RNF141Q8WVD5 230 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 TMEM100Q9NV29 134 aa18.43■□□□□ 0.54
CLN6-201ENST00000249806 H0YL77 283 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 J3QW42 95 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 CDIPTO14735 213 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 DEGS1O15121 323 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 HOXD4P09016 255 aaPredicted RBP18.42■□□□□ 0.54
CLN6-201ENST00000249806 TMEM33P57088 247 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 IL13RA2Q14627 380 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 Q6P435 159 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 IGF2-ASQ6U949 168 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 PCSK4Q6UW60 755 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 ZNF565Q8N9K5 539 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 SMIM3Q9BZL3 60 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 AMDHD2Q9Y303 409 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 HSD17B6O14756 317 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 TUSC2O75896 110 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 MPV17P39210 176 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 WDR31Q8NA23 367 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 GTF3AQ92664 365 aaKnown RBP18.42■□□□□ 0.54
CLN6-201ENST00000249806 MARC2Q969Z3 335 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 USB1Q9BQ65 265 aaKnown RBP18.42■□□□□ 0.54
CLN6-201ENST00000249806 ADAT1Q9BUB4 502 aaKnown RBP18.42■□□□□ 0.54
CLN6-201ENST00000249806 TAF9BQ9HBM6 251 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 CCL28Q9NRJ3 127 aa18.42■□□□□ 0.54
CLN6-201ENST00000249806 TRAV39A0A0B4J263 110 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 B8ZZF3 427 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 TAAR5O14804 337 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 ZNF154Q13106 437 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 BPIFCQ8NFQ6 507 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 TMEM222Q9H0R3 208 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 RIMS4Q9H426 269 aaPredicted RBP18.41■□□□□ 0.54
CLN6-201ENST00000249806 FBXL17Q9UF56 701 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 FBXO9Q9UK97 447 aaPredicted RBP18.41■□□□□ 0.54
CLN6-201ENST00000249806 LRP5LA4QPB2 252 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 RAC2P15153 192 aa18.41■□□□□ 0.54
CLN6-201ENST00000249806 KLF14Q8TD94 323 aaPredicted RBP18.41■□□□□ 0.54
CLN6-201ENST00000249806 WNT2BQ93097 391 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms