RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 C2orf88Q9BSF0 95 aa11.66□□□□□ -0.54
CCDC117-201ENST00000249064 TMEM9BQ9NQ34 198 aa11.66□□□□□ -0.54
CCDC117-201ENST00000249064 MCTS1Q9ULC4 181 aaKnown RBP11.66□□□□□ -0.54
CCDC117-201ENST00000249064 KITLGP21583 273 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 GLIPR1P48060 266 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 EGR4Q05215 589 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 TRA2AQ13595 282 aaKnown RBP eCLIP11.65□□□□□ -0.54
CCDC117-201ENST00000249064 GGTLC2Q14390 218 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 PNLIPRP3Q17RR3 467 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 Q5PR19 223 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 SLC43A2Q8N370 569 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 MAP1LC3B2A6NCE7 125 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 AQP7P3A6NL99 342 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 CHST1O43916 411 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 AMBPP02760 352 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 CEACAM1P13688 526 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 ARL6IP6Q8N6S5 226 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 OR4X1Q8NH49 305 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 OR1L3Q8NH93 324 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 BORCS7Q96B45 105 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 SNHG12Q9BXW3 62 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 MAP1LC3BQ9GZQ8 125 aa11.65□□□□□ -0.54
CCDC117-201ENST00000249064 ZNF552Q9H707 407 aaPredicted RBP11.65□□□□□ -0.54
CCDC117-201ENST00000249064 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 RAB29O14966 203 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 ZNF737O75373 536 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 FGF5P12034 268 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 EGR1P18146 543 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 EFNA3P52797 238 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 CXorf66Q5JRM2 361 aaPredicted RBP11.65□□□□□ -0.55
CCDC117-201ENST00000249064 COL5A1-AS1Q5SY13 56 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 TXNIPQ9H3M7 391 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 ICE1Q9Y2F5 2266 aa11.65□□□□□ -0.55
CCDC117-201ENST00000249064 DLEU1O43261 78 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 HPRT1P00492 218 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 APOA2P02652 100 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 OR10J1P30954 320 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 UNC119Q13432 240 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 TMEM183AQ8IXX5 376 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 OR6C1Q96RD1 312 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 ZNF586Q9NXT0 402 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 FANCMQ8IYD8 2048 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 GAPDHP04406 335 aaKnown RBP11.64□□□□□ -0.55
CCDC117-201ENST00000249064 CHRNB4P30926 498 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 FUT7Q11130 342 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 ZNF468Q5VIY5 522 aaPredicted RBP11.64□□□□□ -0.55
CCDC117-201ENST00000249064 GRINAQ7Z429 371 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 AQP3Q92482 292 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 SLC2A9Q9NRM0 540 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 KIAA1456Q9P272 454 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 TMED3Q9Y3Q3 217 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 PTPRZ1P23471 2315 aaPredicted RBP11.64□□□□□ -0.55
CCDC117-201ENST00000249064 OBSL1O75147 1896 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 IGHV3-15A0A0B4J1V0 119 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 CRYAAP02489 173 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 AMTP48728 403 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 RAB7AP51149 207 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 JOSD1Q15040 202 aaPredicted RBP11.64□□□□□ -0.55
CCDC117-201ENST00000249064 TRIM61Q5EBN2 209 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 CATSPERDQ86XM0 798 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 LPAR5Q9H1C0 372 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 CLEC1BQ9P126 229 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 DENND4AQ7Z401 1863 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
CCDC117-201ENST00000249064 LDLRAD4O15165 306 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 IL2RAP01589 272 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 GZMBP10144 247 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 HSF1Q00613 529 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
CCDC117-201ENST00000249064 EMC4Q5J8M3 183 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 GNRHR2Q96P88 292 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 SHANK1Q9Y566 2161 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 TPPP2P59282 170 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 SLC35B1P78383 322 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 FOXF1Q12946 379 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 C9orf135Q5VTT2 229 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 C22orf15Q8WYQ4 148 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 NAT6Q93015 286 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 DDIT4LQ96D03 193 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 GINS3Q9BRX5 216 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 FOXD3Q9UJU5 478 aaPredicted RBP11.63□□□□□ -0.55
CCDC117-201ENST00000249064 CACNA1GO43497 2377 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 TRIOO75962 3097 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 A8MWP6 167 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 GCGP01275 180 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 FABP6P51161 128 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 TAS2R30P59541 319 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 ERVFC1-1P60608 527 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 SGCBQ16585 318 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 ACOT6Q3I5F7 207 aaPredicted RBP11.63□□□□□ -0.55
CCDC117-201ENST00000249064 TMEM230Q96A57 120 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 MFRPQ9BY79 579 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 S1PR5Q9H228 398 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 FSCN3Q9NQT6 498 aa11.63□□□□□ -0.55
CCDC117-201ENST00000249064 SEMA5BQ9P283 1151 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms