RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GLS2Q9UI32 602 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 GPR132Q9UNW8 380 aa12.81□□□□□ -0.36
HDHD3-201ENST00000238379 C17orf100A8MU93 164 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 PSPNO60542 156 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 TNFSF4P23510 183 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 MDH2P40926 338 aaKnown RBP12.8□□□□□ -0.36
HDHD3-201ENST00000238379 EIF2B2P49770 351 aaKnown RBP12.8□□□□□ -0.36
HDHD3-201ENST00000238379 C4orf46Q504U0 113 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF880Q6PDB4 577 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 GAPTQ8N292 157 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 MUC20Q8N307 709 aaPredicted RBP12.8□□□□□ -0.36
HDHD3-201ENST00000238379 DIRC2Q96SL1 478 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 GCM1Q9NP62 436 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 ING3Q9NXR8 418 aa12.8□□□□□ -0.36
HDHD3-201ENST00000238379 RFPL4AA6NLU0 287 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 RFPL4AL1F8VTS6 287 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 IFNL4K9M1U5 179 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 ZG16O60844 167 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 PLAUP00749 431 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 CD55P08174 381 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 FPR2P25090 351 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF497Q6ZNH5 498 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 FAM90A1Q86YD7 464 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 TCTE3Q8IZS6 198 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 ADAD2Q8NCV1 583 aaKnown RBP12.79□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF431Q8TF32 576 aaPredicted RBP12.79□□□□□ -0.36
HDHD3-201ENST00000238379 DMRTB1Q96MA1 342 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF2Q9BSG1 426 aaPredicted RBP12.79□□□□□ -0.36
HDHD3-201ENST00000238379 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 C5orf66Q9H5L9 145 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 DECR2Q9NUI1 292 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 RNF115Q9Y4L5 304 aa12.79□□□□□ -0.36
HDHD3-201ENST00000238379 POM121CA8CG34 1229 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 TRDCB7Z8K6 153 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 M0R233 179 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF205O95201 554 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 SCTP09683 121 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 LOXP28300 417 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 SURF2Q15527 256 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 IGSF11Q5DX21 431 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 FAHD2BQ6P2I3 314 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 C5orf24Q7Z6I8 188 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 ZNF808Q8N4W9 903 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 LILRB1Q8NHL6 650 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 ITLN2Q8WWU7 325 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 FAHD2AQ96GK7 314 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 RTBDNQ9BSG5 229 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 HCFC1P51610 2035 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 CACNA1DQ01668 2161 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 DEFB108AA8MXU0 73 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 H7C1Q1 480 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 FABP7O15540 132 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 CLDN14O95500 239 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 TFF1P04155 84 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 PSG2P11465 335 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 RCC1P18754 421 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 AGAP20933 346 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 ZBTB25P24278 435 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 APOBEC3AP31941 199 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 KIR2DS4P43632 304 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 DHRS2Q13268 280 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 KIR2DS1Q14954 304 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 MST1LQ2TV78 715 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 ZCCHC24Q8N2G6 241 aaKnown RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 CD177Q8N6Q3 437 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 TMEM185AQ8NFB2 350 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 OR5T2Q8NGG2 359 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 Q8TCH9 128 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 ERGIC1Q969X5 290 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 SCGB3A2Q96PL1 93 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 TMPRSS13Q9BYE2 586 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 SEBOXQ9HB31 216 aaPredicted RBP12.78□□□□□ -0.36
HDHD3-201ENST00000238379 WIPI2Q9Y4P8 454 aa12.78□□□□□ -0.36
HDHD3-201ENST00000238379 SPTBN1Q01082 2364 aaKnown RBP12.77□□□□□ -0.36
HDHD3-201ENST00000238379 PKDREJQ9NTG1 2253 aa12.77□□□□□ -0.36
HDHD3-201ENST00000238379 IGKV1D-17A0A075B6S4 117 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 MEIKINA0A087WXM9 373 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 FCGR2CP31995 323 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 PRDX2P32119 198 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 UBE2MP61081 183 aaKnown RBP12.77□□□□□ -0.37
HDHD3-201ENST00000238379 CCL8P80075 99 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 COL10A1Q03692 680 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 BAMBIQ13145 260 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 PPP1R1AQ13522 171 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 ATXN7L3Q14CW9 347 aaPredicted RBP12.77□□□□□ -0.37
HDHD3-201ENST00000238379 HERPUD1Q15011 391 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 EFNB3Q15768 340 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 SPICQ8N5J4 248 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 BOLLQ8N9W6 283 aaKnown RBP12.77□□□□□ -0.37
HDHD3-201ENST00000238379 TMEM230Q96A57 120 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 TMEM204Q9BSN7 226 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 RNF7Q9UBF6 113 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 ZNF222Q9UK12 451 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 NPTNQ9Y639 398 aa12.77□□□□□ -0.37
HDHD3-201ENST00000238379 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
HDHD3-201ENST00000238379 C9orf170A2RU37 121 aa12.76□□□□□ -0.37
HDHD3-201ENST00000238379 HLA-AP01891 365 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms