RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ZNF418Q8TF45 676 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-201ENST00000230480 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 TMEM203Q969S6 136 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 SLC25A28Q96A46 364 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 MGLLQ99685 303 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 TMED9Q9BVK6 235 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 SUCNR1Q9BXA5 334 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 RHOFQ9HBH0 211 aa11.18□□□□□ -0.62
VEGFA-201ENST00000230480 FBN3Q75N90 2809 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 A0A1W2PQ09 198 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 CLDN34H7C241 214 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 SH2D1BO14796 132 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 MGST3O14880 152 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 GABARAPO95166 117 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 MELTFP08582 738 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 BPIFB3P59826 476 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 QRFPP83859 136 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 GRK1Q15835 563 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 MFSD4AQ8N468 514 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 MS4A15Q8N5U1 240 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 CORO2AQ92828 525 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 PPA2Q9H2U2 334 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 METTL8Q9H825 291 aaKnown RBP11.17□□□□□ -0.62
VEGFA-201ENST00000230480 NEK6Q9HC98 313 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 EXOSC4Q9NPD3 245 aaKnown RBP11.17□□□□□ -0.62
VEGFA-201ENST00000230480 ING4Q9UNL4 249 aa11.17□□□□□ -0.62
VEGFA-201ENST00000230480 FAM90A8PA6NJQ4 464 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 GEMIN2O14893 280 aaKnown RBP11.16□□□□□ -0.62
VEGFA-201ENST00000230480 NPFFO15130 113 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-201ENST00000230480 HTR3BO95264 441 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 CSN2P05814 226 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 ZNF728P0DKX0 622 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 GABRR1P24046 479 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 EEF1B2P24534 225 aaKnown RBP11.16□□□□□ -0.62
VEGFA-201ENST00000230480 CD40LGP29965 261 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 UBE2E1P51965 193 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 P2RX3P56373 397 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 MEF2CQ06413 473 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-201ENST00000230480 EDDM3AQ14507 147 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 IL13RA2Q14627 380 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 RSBN1Q5VWQ0 802 aaPredicted RBP11.16□□□□□ -0.62
VEGFA-201ENST00000230480 CD200R1LQ6Q8B3 271 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 CEACAM19Q7Z692 300 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 RTN4RL2Q86UN3 420 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 LDLRAD3Q86YD5 345 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 CDH26Q8IXH8 852 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 OR5D13Q8NGL4 314 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 PIFOQ8TCI5 191 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 CCDC90BQ9GZT6 254 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 KCNK15Q9H427 330 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 IFT22Q9H7X7 185 aa11.16□□□□□ -0.62
VEGFA-201ENST00000230480 CMYA5Q8N3K9 4069 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 TMEM89A2RUT3 159 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 ODF3BA8MYP8 253 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 DEGS1O15121 323 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 CYB5AP00167 134 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 RNASE1P07998 156 aaKnown RBP11.15□□□□□ -0.62
VEGFA-201ENST00000230480 HSMCR30P0CW71 290 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 SRMP19623 302 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 SAA4P35542 130 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 IER3P46695 156 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 EDDM3BP56851 147 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 RBM11P57052 281 aaKnown RBP11.15□□□□□ -0.62
VEGFA-201ENST00000230480 PPP3R1P63098 170 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 RELBQ01201 579 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 PAX5Q02548 391 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 SCN1BQ07699 218 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 BAMBIQ13145 260 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 TAF9Q16594 264 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 UBE2UQ5VVX9 321 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 BRICD5Q6PL45 260 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 GLIPR1L1Q6UWM5 242 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-201ENST00000230480 SLC16A12Q6ZSM3 486 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 GDPD3Q7L5L3 318 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 LHFPL4Q7Z7J7 247 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 OR6Q1Q8NGQ2 317 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 GPER1Q99527 375 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 RCC2Q9P258 522 aaKnown RBP11.15□□□□□ -0.62
VEGFA-201ENST00000230480 ST3GAL6Q9Y274 331 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 A3GALT2U3KPV4 340 aa11.15□□□□□ -0.62
VEGFA-201ENST00000230480 TRAV39A0A0B4J263 110 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 IGHV4-59P01825 116 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 ZNF44P15621 663 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 SERPINA2P20848 420 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 PLA2G7Q13093 441 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 ATXN7L3Q14CW9 347 aaPredicted RBP11.14□□□□□ -0.63
VEGFA-201ENST00000230480 SPCS2Q15005 226 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 RSU1Q15404 277 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 SLC22A6Q4U2R8 563 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 OR10K2Q6IF99 312 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 FAM53AQ6NSI3 398 aaPredicted RBP11.14□□□□□ -0.63
VEGFA-201ENST00000230480 Q6ZPA2 131 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 C5orf24Q7Z6I8 188 aa11.14□□□□□ -0.63
VEGFA-201ENST00000230480 AKAP14Q86UN6 197 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms