RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 OR52M1Q8NGK5 317 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 MRGPRFQ96AM1 343 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 CLDN23Q96B33 292 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 RSG1Q9BU20 258 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 HEXAP06865 529 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 NAT2P11245 290 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 CD46P15529 392 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 HLA-DRB3P79483 266 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF383Q8NA42 475 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 NPTNQ9Y639 398 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 RPL29P47914 159 aaKnown RBP12.01□□□□□ -0.49
NFKB1-201ENST00000226574 TXN2Q99757 166 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 A0A0J9YW62 118 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 C17orf112F2Z3M2 114 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 GDF9O60383 454 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 IRF2P14316 349 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF343Q6P1L6 599 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF519Q8TB69 540 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
NFKB1-201ENST00000226574 FAM206AQ9NX38 181 aa12.01□□□□□ -0.49
NFKB1-201ENST00000226574 TRGC2P03986 189 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 HKR1P10072 659 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 SULT1A2P50226 295 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 ENDOGQ14249 297 aaKnown RBP12□□□□□ -0.49
NFKB1-201ENST00000226574 IL13RA2Q14627 380 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 SNAI3Q3KNW1 292 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 PINX1Q96BK5 328 aaKnown RBP12□□□□□ -0.49
NFKB1-201ENST00000226574 HIPK2Q9H2X6 1198 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 PI4KAP42356 2102 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 OR8U8P0C7N1 319 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 FSTP19883 344 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 TMEM50BP56557 158 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 PLPPR5Q32ZL2 321 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 D2HGDHQ8N465 521 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 CHST5Q9GZS9 411 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 MTCH1Q9NZJ7 389 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 PLXND1Q9Y4D7 1925 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 DOCK11Q5JSL3 2073 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 H0YIZ8 118 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 SNRPCP09234 159 aaKnown RBP12□□□□□ -0.49
NFKB1-201ENST00000226574 RAC1P63000 192 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 PMS2P11Q13670 270 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 MYO7BQ6PIF6 2116 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 RNF144BQ7Z419 303 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 GPR61Q9BZJ8 451 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 UCK1Q9HA47 277 aa12□□□□□ -0.49
NFKB1-201ENST00000226574 PATE3B3GLJ2 98 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 C5orf67F2Z3F1 127 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 SPINT2O43291 252 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 OR7C2O60412 319 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 CER1O95813 267 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 SCTP09683 121 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 MST1P26927 711 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 TEX30Q5JUR7 227 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 BTNL3Q6UXE8 466 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 SP7Q8TDD2 431 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-201ENST00000226574 TPPP3Q9BW30 176 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 PARP11Q9NR21 331 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 G3V3Q6 166 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 SH2D1BO14796 132 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 ENSAO43768 121 aaKnown RBP11.99□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF737O75373 536 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF708P17019 499 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 BCL3P20749 454 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 TBC1D28Q2M2D7 210 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 ACER2Q5QJU3 275 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 KMT5CQ86Y97 462 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 OR2M3Q8NG83 312 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 IL22RA2Q969J5 263 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 RHOVQ96L33 236 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 TMEM204Q9BSN7 226 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 RTL8AQ9BWD3 113 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 ACTR3CQ9C0K3 210 aaPredicted RBP11.99□□□□□ -0.49
NFKB1-201ENST00000226574 ZDHHC11Q9H8X9 412 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 TSC2P49815 1807 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 A0A087X0M5 115 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 A0A1B0GX30 115 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 XKRY2A2RUG3 117 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 CD63P08962 238 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 PGA3P0DJD8 388 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 COX5AP20674 150 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 NAAAQ02083 359 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 SLC38A11Q08AI6 406 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 VAX1Q5SQQ9 334 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 FAM58AQ8N1B3 248 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF665Q9H7R5 613 aa11.99□□□□□ -0.49
NFKB1-201ENST00000226574 TIAF1O95411 115 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 FCGR3AP08637 254 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 VDAC1P21796 283 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF92Q03936 586 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 PLGLAQ15195 96 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 FFAR4Q5NUL3 377 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 WDR25Q64LD2 544 aaPredicted RBP11.98□□□□□ -0.49
NFKB1-201ENST00000226574 PRR27Q6MZM9 219 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 SPEM1Q8N4L4 309 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 TPRX1Q8N7U7 411 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 ZNF501Q96CX3 271 aaPredicted RBP11.98□□□□□ -0.49
NFKB1-201ENST00000226574 WBP1LQ9NX94 342 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 SLC2A8Q9NY64 477 aa11.98□□□□□ -0.49
NFKB1-201ENST00000226574 OR3A1P47881 315 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms