RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 GJC3Q8NFK1 279 aa12.35□□□□□ -0.43
SHPK-201ENST00000225519 OR2AE1Q8NHA4 323 aa12.35□□□□□ -0.43
SHPK-201ENST00000225519 NEK7Q8TDX7 302 aa12.35□□□□□ -0.43
SHPK-201ENST00000225519 B3GAT1Q9P2W7 334 aa12.35□□□□□ -0.43
SHPK-201ENST00000225519 UNC80Q8N2C7 3258 aa12.35□□□□□ -0.43
SHPK-201ENST00000225519 M0R135 149 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 TAS2R30P59541 319 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 RPUSD4Q96CM3 377 aaKnown RBP12.34□□□□□ -0.43
SHPK-201ENST00000225519 ZNF799Q96GE5 643 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 METTL7AQ9H8H3 244 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 NCOA6Q14686 2063 aaPredicted RBP12.34□□□□□ -0.43
SHPK-201ENST00000225519 GPR179Q6PRD1 2367 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 GCGP01275 180 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 COX5BP10606 129 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 PAX5Q02548 391 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
SHPK-201ENST00000225519 TBC1D26Q86UD7 250 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 ATP5SQ99766 215 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 ANGPTL4Q9BY76 406 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 PPYP01298 95 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 RPL29P47914 159 aaKnown RBP12.34□□□□□ -0.43
SHPK-201ENST00000225519 TMEM267Q0VDI3 215 aaPredicted RBP12.34□□□□□ -0.43
SHPK-201ENST00000225519 BEND2Q8NDZ0 799 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 LMX1AQ8TE12 382 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 NAT6Q93015 286 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 MOB3AQ96BX8 217 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 WFIKKN1Q96NZ8 548 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 DECR2Q9NUI1 292 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 HS3ST3A1Q9Y663 406 aa12.34□□□□□ -0.43
SHPK-201ENST00000225519 TRBV24-1A0A075B6N3 115 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 IQCJQ1A5X6 159 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 FAM90A2PQ658T7 463 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 SLC25A47Q6Q0C1 308 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 SRD5A3Q9H8P0 318 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 ST3GAL6Q9Y274 331 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 MSR1P21757 451 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 RND2P52198 227 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 ELLP55199 621 aaPredicted RBP12.33□□□□□ -0.44
SHPK-201ENST00000225519 P2RY6Q15077 328 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 ACTR3CQ9C0K3 210 aaPredicted RBP12.33□□□□□ -0.44
SHPK-201ENST00000225519 TMEM222Q9H0R3 208 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 SDF2L1Q9HCN8 221 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 IL17BQ9UHF5 180 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 TESK1Q15569 626 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 H1FOOQ8IZA3 346 aaPredicted RBP12.33□□□□□ -0.44
SHPK-201ENST00000225519 CTDSP1Q9GZU7 261 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
SHPK-201ENST00000225519 FUT9Q9Y231 359 aa12.33□□□□□ -0.44
SHPK-201ENST00000225519 TMEM131Q92545 1883 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 IGKV3D-11A0A0A0MRZ8 115 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 A0A1B0GWJ7 208 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 GALR1P47211 349 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 BAXQ07812 192 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 BATFQ16520 125 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 SSC4DQ8WTU2 575 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 SPTSSAQ969W0 71 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 RPRMQ9NS64 109 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 TRAF3IP2O43734 574 aaPredicted RBP12.32□□□□□ -0.44
SHPK-201ENST00000225519 LCATP04180 440 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 EFNA3P52797 238 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 FAM131CQ96AQ9 280 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 TK1P04183 234 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 CD55P08174 381 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 IL24Q13007 206 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 CNN3Q15417 329 aaKnown RBP12.32□□□□□ -0.44
SHPK-201ENST00000225519 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 WDR5BQ86VZ2 330 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 LRP11Q86VZ4 500 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 OSR2Q8N2R0 312 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 RCC1LQ96I51 464 aaKnown RBP12.32□□□□□ -0.44
SHPK-201ENST00000225519 LRRC61Q9BV99 259 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 SNHG12Q9BXW3 62 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 CISD1Q9NZ45 108 aaKnown RBP12.32□□□□□ -0.44
SHPK-201ENST00000225519 CBY1Q9Y3M2 126 aa12.32□□□□□ -0.44
SHPK-201ENST00000225519 OR4A8P0C604 315 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 OR6X1Q8NH79 312 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 PCGF1Q9BSM1 259 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 TMEM242Q9NWH2 141 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 PRSS50Q9UI38 385 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 TMEM241Q24JQ0 296 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 OXGR1Q96P68 337 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 SLC7A10Q9NS82 523 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 A0A1W2PNV4 684 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 DLX2Q07687 328 aaPredicted RBP12.31□□□□□ -0.44
SHPK-201ENST00000225519 BSXQ3C1V8 233 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 P4HTMQ9NXG6 502 aa12.31□□□□□ -0.44
SHPK-201ENST00000225519 A0A0U1RQV5 110 aa12.3□□□□□ -0.44
SHPK-201ENST00000225519 POU2F2P09086 479 aa12.3□□□□□ -0.44
SHPK-201ENST00000225519 CTHP32929 405 aa12.3□□□□□ -0.44
SHPK-201ENST00000225519 DPPA3Q6W0C5 159 aa12.3□□□□□ -0.44
SHPK-201ENST00000225519 C5orf24Q7Z6I8 188 aa12.3□□□□□ -0.44
SHPK-201ENST00000225519 SELENOHQ8IZQ5 122 aaKnown RBP12.3□□□□□ -0.44
SHPK-201ENST00000225519 RNASEH2CQ8TDP1 164 aaKnown RBP12.3□□□□□ -0.44
SHPK-201ENST00000225519 NAT8Q9UHE5 227 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms