RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SUMF2Q8NBJ7 301 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 SLAMF9Q96A28 289 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 NCOR1O75376 2440 aa14.86□□□□□ -0.03
USB1-201ENST00000219281 KIAA1549Q9HCM3 1950 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 CDRT15L2A8MXV6 281 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 ADAM20O43506 726 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 IGHV3-9P01782 118 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 SRPXP78539 464 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 ZNF266Q14584 549 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 CXorf66Q5JRM2 361 aaPredicted RBP14.85□□□□□ -0.03
USB1-201ENST00000219281 SOHLH1Q5JUK2 328 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 ZNF818PQ6ZRF7 136 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 FAM185AQ8N0U4 392 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 TMEM171Q8WVE6 324 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 PAPOLGQ9BWT3 736 aaKnown RBP14.85□□□□□ -0.03
USB1-201ENST00000219281 PLEKHF2Q9H8W4 249 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 METTL1Q9UBP6 276 aaKnown RBP14.85□□□□□ -0.03
USB1-201ENST00000219281 A0A1B0GW64 132 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 BCL3P20749 454 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 ACP1P24666 158 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 CPEB3Q8NE35 698 aaKnown RBP14.85□□□□□ -0.03
USB1-201ENST00000219281 OR2V1Q8NHB1 315 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 TMEM56Q96MV1 263 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 FAM86C1Q9NVL1 165 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 TMEM56-RWDD3S4R434 201 aa14.85□□□□□ -0.03
USB1-201ENST00000219281 BDP1A6H8Y1 2624 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 RBFOX3A6NFN3 312 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 PROB1E7EW31 1015 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 PITX3O75364 302 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 NXPH3O95157 252 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 SCTP09683 121 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 NQO2P16083 231 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 VAMP2P63027 116 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 ABLIM2Q6H8Q1 611 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 GAPTQ8N292 157 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 TMEM252Q8N6L7 170 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 ABHD3Q8WU67 409 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 SGCZQ96LD1 299 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 TECTBQ96PL2 329 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 HS3ST6Q96QI5 342 aa14.84□□□□□ -0.03
USB1-201ENST00000219281 SEBOXQ9HB31 216 aaPredicted RBP14.84□□□□□ -0.03
USB1-201ENST00000219281 SLC33A1O00400 549 aaPredicted RBP14.83□□□□□ -0.03
USB1-201ENST00000219281 MMP7P09237 267 aaPredicted RBP14.83□□□□□ -0.03
USB1-201ENST00000219281 FOLR3P41439 243 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 CLDN15P56746 228 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 SPSB3Q6PJ21 355 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 OR5C1Q8NGR4 320 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 ZNF845Q96IR2 970 aaPredicted RBP14.83□□□□□ -0.03
USB1-201ENST00000219281 ADGRG7Q96K78 797 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 C1QTNF5Q9BXJ0 243 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 ARRDC1-AS1Q9H2J1 176 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 Q9N2K0 584 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 GLRX2Q9NS18 164 aa14.83□□□□□ -0.03
USB1-201ENST00000219281 LYRM2Q9NU23 88 aaPredicted RBP14.83□□□□□ -0.03
USB1-201ENST00000219281 HSPB6O14558 160 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 HSD17B6O14756 317 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 CST7O76096 145 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 OR2C1O95371 312 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 IGHV2-5P01817 119 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 TK1P04183 234 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 CCNOP22674 350 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 RPS23P62266 143 aaKnown RBP14.83□□□□□ -0.04
USB1-201ENST00000219281 RAB1AP62820 205 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 RIPPLY2Q5TAB7 128 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 SPSB4Q96A44 273 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 SPIN2AQ99865 258 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 SPIN2BQ9BPZ2 258 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 SLC25A31Q9H0C2 315 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 NIT2Q9NQR4 276 aa14.83□□□□□ -0.04
USB1-201ENST00000219281 IGKV1D-13A0A0B4J2D9 117 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 LINC00587B1AMM8 73 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 OR8U8P0C7N1 319 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 IGKV1-13P0DP09 117 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 CEBPGP53567 150 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 ODF3L1Q8IXM7 274 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 TMEM217Q8N7C4 229 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 OR56B2PQ8NGI1 322 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 MALSU1Q96EH3 234 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 ZNF251Q9BRH9 671 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 CRIM1Q9NZV1 1036 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 LRRC3CA6NJW4 275 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 FABP1P07148 127 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 MPLP40238 635 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 HAAOP46952 286 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 DYNLT3P51808 116 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 RPS18P62269 152 aaKnown RBP14.82□□□□□ -0.04
USB1-201ENST00000219281 HAGHQ16775 308 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 PRDM14Q9GZV8 571 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 FGF23Q9GZV9 251 aaPredicted RBP14.82□□□□□ -0.04
USB1-201ENST00000219281 IL36RNQ9UBH0 155 aa14.82□□□□□ -0.04
USB1-201ENST00000219281 COL27A1Q8IZC6 1860 aaPredicted RBP14.81□□□□□ -0.04
USB1-201ENST00000219281 SLC22A20A6NK97 555 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 B4E171 279 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 HSPA12AO43301 675 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 TMEM50AO95807 157 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 EPHA1P21709 976 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 TSPAN7P41732 249 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 GPM6AP51674 278 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 RND3P61587 244 aa14.81□□□□□ -0.04
USB1-201ENST00000219281 HERPUD1Q15011 391 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms