RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SMPD2O60906 423 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 RFPL3SP0C7P2 107 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 ZBTB34Q8NCN2 500 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 NFAM1Q8NET5 270 aaPredicted RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 OR52L2PQ8NGH6 319 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 OR4A4PQ8NGN8 299 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 SMCO4Q9NRQ5 59 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 COA4Q9NYJ1 87 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 CACNG5Q9UF02 275 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 PCDHGA9Q9Y5G4 932 aaKnown RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 PTPRFP10586 1907 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 LOC102723996A0A087X1L8 192 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 OR5H1A6NKK0 313 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 SEMA7AO75326 666 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 GYPAP02724 150 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 CTSDP07339 412 aaPredicted RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 PDLIM4P50479 330 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 RAB5CP51148 216 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 PIGYQ3MUY2 71 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 FLYWCH2Q96CP2 140 aaKnown RBP9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 R3HDM4Q96D70 268 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF714Q96N38 554 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 CCL19Q99731 98 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 SAMD10Q9BYL1 202 aa9.01□□□□□ -0.97
NIPAL3-201ENST00000003912 IGLV1-36A0A0B4J1U3 117 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 UBE2L5PA0A1B0GUS4 154 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 B9A039 149 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 KRBOX1C9JBD0 128 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 SYNGR3O43761 229 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 CD1AP06126 327 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 CFHR1Q03591 330 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 C19orf57Q0VDD7 668 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 TIMM23BQ5SRD1 257 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 GLCCI1Q86VQ1 547 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 RPS4Y2Q8TD47 263 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 GPR137Q96N19 417 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 PARP12Q9H0J9 701 aaKnown RBP9□□□□□ -0.97
NIPAL3-201ENST00000003912 NPIPB13A6NJU9 1138 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 NPIPB4C9JG80 1138 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 J3QW42 95 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 AESQ08117 197 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF787Q6DD87 383 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 OR4F17Q8NGA8 305 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 OR4F5Q8NH21 305 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 NTNG2Q96CW9 530 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 OR4F4Q96R69 305 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 CCL13Q99616 98 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 GNG13Q9P2W3 67 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 KLHDC2Q9Y2U9 406 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 AVPI1Q5T686 147 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 HSD17B10Q99714 261 aaKnown RBP9□□□□□ -0.97
NIPAL3-201ENST00000003912 C20orf24Q9BUV8 137 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 DAOP14920 347 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 RBM11P57052 281 aaKnown RBP9□□□□□ -0.97
NIPAL3-201ENST00000003912 ROM1Q03395 351 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 GVQW1Q8N7I0 195 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 TMED6Q8WW62 240 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 MARS2Q96GW9 593 aaKnown RBP9□□□□□ -0.97
NIPAL3-201ENST00000003912 MRPS18CQ9Y3D5 142 aaKnown RBP9□□□□□ -0.97
NIPAL3-201ENST00000003912 ABCA7Q8IZY2 2146 aa9□□□□□ -0.97
NIPAL3-201ENST00000003912 DNASE2O00115 360 aaPredicted RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 CST7O76096 145 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 TAGLN2P37802 199 aaKnown RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 AARDQ4LEZ3 155 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 ETV3LQ6ZN32 361 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 BSCL2Q96G97 398 aaPredicted RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 KCNK15Q9H427 330 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 IGHMP01871 453 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 OR5AC1P0C628 307 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 VSIG8P0DPA2 414 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 AKR1C3P42330 323 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 BAP18Q8IXM2 172 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 MUC15Q8N387 334 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 LINC01560Q8TB33 94 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 PRDM14Q9GZV8 571 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 PCM1Q15154 2024 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 TRAV8-7A0A075B6U6 113 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 CTDSPLO15194 276 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 TXNL1O43396 289 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 GCM2O75603 506 aaPredicted RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 KIR3DL2P43630 455 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 RPS10P46783 165 aaKnown RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 GFRA1P56159 465 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 PPP1R1AQ13522 171 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 SLC7A5P1Q8MH63 180 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 RBPMSQ93062 196 aaKnown RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 MIOXQ9UGB7 285 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF107Q9UII5 783 aaPredicted RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 LSM2Q9Y333 95 aaKnown RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 IGKV1D-42A0A075B6H8 117 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 ANKRD20A5PA0PJZ0 165 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 LRRC3CA6NJW4 275 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 CELA3AP09093 270 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 ZNF708P17019 499 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 USF2Q15853 346 aaPredicted RBP8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 TOR2AQ5JU69 321 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 TMEM54Q969K7 222 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 TMUB1Q9BVT8 246 aa8.99□□□□□ -0.97
NIPAL3-201ENST00000003912 ST6GALNAC2Q9UJ37 374 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms