RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 AF067061O70616 171 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Avpr2O88721 371 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Rps2P25444 293 aaKnown RBP16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Fkbp2P45878 140 aaKnown RBP16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Teddm3Q9CQH1 294 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Snu13Q9D0T1 128 aaKnown RBP16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Wdr5bQ9D7H2 328 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Zfand6Q9DCH6 223 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Syt9Q9R0N9 491 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Hebp2Q9WU63 205 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 RbmxQ9WV02 391 aaKnown RBP16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Cxcl15Q9WVL7 167 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Ly6g6dQ9Z1Q3 135 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Piezo1E2JF22 2547 aa16.8■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm13547A2ARC0 163 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Slc2a1P17809 492 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Sult4a1P63046 284 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 F13bQ07968 669 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm12258Q5NC63 627 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Zdhhc8Q5Y5T5 762 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Znf629Q6A085 867 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Kyat3Q71RI9 455 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Pif1Q80SX8 650 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Fam53bQ8BGR5 422 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Zfp286Q8C0E6 519 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Olfr1450Q8VF19 325 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Abhd3Q91ZH7 411 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Ms4a4dQ99N05 225 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Tmem33Q9CR67 247 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Tmem186Q9CR76 216 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 NubplQ9CWD8 319 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Mrps28Q9CY16 186 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Exosc8Q9D753 276 aaKnown RBP16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Znf593Q9DB42 134 aaKnown RBP16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Clec6aQ9JKF4 209 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Mapk7Q9WVS8 806 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Mbd2Q9Z2E1 414 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm20489A2AGH5 449 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Rnf148G3X9R7 316 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm21972J3QN38 98 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 BaxQ07813 192 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Olfr733Q14AK5 308 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm7534Q3UU21 679 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Grb2Q60631 217 aaKnown RBP16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Tra2aQ6PFR5 281 aaKnown RBP16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Wdr48Q8BH57 676 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Slc17a5Q8BN82 495 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Iglon5Q8HW98 336 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Crb3Q8QZT4 113 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Olfr1002Q8VFK2 318 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Olfr930Q9EQ99 308 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 HrgQ9ESB3 525 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Myoz1Q9JK37 296 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Cln8Q9QUK3 288 aa16.79■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm21488A0A087WR99 222 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Tgfbr3O88393 850 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Hoxb5P09079 269 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Rpl12P35979 165 aaKnown RBP16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Dnase1P49183 284 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 A3galt2Q3V1N9 370 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Ewsr1Q61545 655 aaKnown RBP16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 OmgQ63912 440 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Glra1Q64018 457 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 BC061237Q6P8I2 184 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Mfsd8Q8BH31 519 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Adhfe1Q8R0N6 465 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gpn1Q8VCE2 372 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Srsf4Q8VE97 489 aaKnown RBP16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 SelenosQ9BCZ4 190 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 GmfgQ9ERL7 142 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 LitafQ9JLJ0 161 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Ccr9Q9WUT7 369 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Tex38A2A8T7 201 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Dgat2l6A2ADU8 337 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm20834J3QM72 227 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Cd7P50283 210 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Gm10644Q3TZG3 87 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Negr1Q80Z24 348 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Q8BG31 207 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Vmn1r193Q8R258 319 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Olfr1270Q8VGP3 304 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 PecrQ99MZ7 303 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Atp23Q9CWQ3 201 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Tmem175Q9CXY1 499 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Nol3Q9D1X0 220 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Zdhhc4Q9D6H5 343 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Fam210bQ9D8B6 190 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Enpp5Q9EQG7 477 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Syt6Q9R0N8 511 aa16.78■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Trbv12-1A0A0B4J1H0 124 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Igkv6-32A0A140T8N9 115 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Mn1D3YWE6 1297 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Ascl4M0QW46 144 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Cd200O54901 278 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Igh-VJ558P01758 117 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Slc25a4P48962 298 aaKnown RBP16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 StarP51557 284 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Ccl9P51670 122 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Cldn18P56857 264 aa16.77■□□□□ 0.28
Ccdc50-201ENSMUST00000039443 Dok1P97465 482 aa16.77■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 44.5 ms