RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 UPF3BQ9BZI7 483 aaKnown RBP21.12■□□□□ 0.97
PHGDH-232ENST00000641947 CCDC88AQ3V6T2 1871 aa21.12■□□□□ 0.97
PHGDH-232ENST00000641947 COL9A3Q14050 684 aaPredicted RBP21.11■□□□□ 0.97
PHGDH-232ENST00000641947 SPRYD3Q8NCJ5 442 aa21.11■□□□□ 0.97
PHGDH-232ENST00000641947 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.11■□□□□ 0.971e-14■□□□□ 11
PHGDH-232ENST00000641947 CHD4Q14839 1912 aa21.11■□□□□ 0.97
PHGDH-232ENST00000641947 ZNF532Q9HCE3 1301 aa21.11■□□□□ 0.97
PHGDH-232ENST00000641947 MAST2Q6P0Q8 1798 aa21.11■□□□□ 0.97
PHGDH-232ENST00000641947 NPR1P16066 1061 aa21.1■□□□□ 0.97
PHGDH-232ENST00000641947 PDE6BP35913 854 aa21.1■□□□□ 0.97
PHGDH-232ENST00000641947 NEK4P51957 841 aa21.1■□□□□ 0.97
PHGDH-232ENST00000641947 LEMD3Q9Y2U8 911 aa21.1■□□□□ 0.97
PHGDH-232ENST00000641947 K7ELQ4 463 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-232ENST00000641947 PPEF1O14829 653 aaPredicted RBP21.1■□□□□ 0.97
PHGDH-232ENST00000641947 HSPD1P10809 573 aaKnown RBP21.1■□□□□ 0.97
PHGDH-232ENST00000641947 HIBADHP31937 336 aaKnown RBP21.1■□□□□ 0.97
PHGDH-232ENST00000641947 UBE3CQ15386 1083 aa21.1■□□□□ 0.97
PHGDH-232ENST00000641947 LRRFIP1Q32MZ4 808 aaKnown RBP21.1■□□□□ 0.97
PHGDH-232ENST00000641947 OLFM4Q6UX06 510 aa21.1■□□□□ 0.97
PHGDH-232ENST00000641947 VPS37DQ86XT2 251 aa21.1■□□□□ 0.97
PHGDH-232ENST00000641947 GNL3LQ9NVN8 582 aaKnown RBP21.1■□□□□ 0.97
PHGDH-232ENST00000641947 A0A0G2JLW4 131 aa21.09■□□□□ 0.97
PHGDH-232ENST00000641947 NSFL1CQ9UNZ2 370 aaKnown RBP21.09■□□□□ 0.97
PHGDH-232ENST00000641947 RPAP1Q9BWH6 1393 aaPredicted RBP21.09■□□□□ 0.97
PHGDH-232ENST00000641947 CPA1P15085 419 aa21.08■□□□□ 0.97
PHGDH-232ENST00000641947 ZSCAN25Q6NSZ9 544 aa21.08■□□□□ 0.97
PHGDH-232ENST00000641947 MAGEB6Q8N7X4 407 aa21.08■□□□□ 0.97
PHGDH-232ENST00000641947 DSCC1Q9BVC3 393 aa21.08■□□□□ 0.97
PHGDH-232ENST00000641947 PODXL2Q9NZ53 605 aa21.08■□□□□ 0.97
PHGDH-232ENST00000641947 KIF13BQ9NQT8 1826 aa21.08■□□□□ 0.97
PHGDH-232ENST00000641947 KIAA1551Q9HCM1 1747 aa21.08■□□□□ 0.96
PHGDH-232ENST00000641947 GPAA1O43292 621 aa21.08■□□□□ 0.96
PHGDH-232ENST00000641947 UFL1O94874 794 aa21.08■□□□□ 0.96
PHGDH-232ENST00000641947 CCDC125Q86Z20 511 aa21.08■□□□□ 0.96
PHGDH-232ENST00000641947 SLKQ9H2G2 1235 aaPredicted RBP21.08■□□□□ 0.96
PHGDH-232ENST00000641947 POLLQ9UGP5 575 aa21.08■□□□□ 0.96
PHGDH-232ENST00000641947 DENND2AQ9ULE3 1009 aa21.08■□□□□ 0.96
PHGDH-232ENST00000641947 ST18O60284 1047 aa21.07■□□□□ 0.96
PHGDH-232ENST00000641947 C15orf52Q6ZUT6 534 aaKnown RBP21.07■□□□□ 0.96
PHGDH-232ENST00000641947 SP8Q8IXZ3 490 aa21.07■□□□□ 0.96
PHGDH-232ENST00000641947 MASTLQ96GX5 879 aa21.07■□□□□ 0.96
PHGDH-232ENST00000641947 ATP6V0A2Q9Y487 856 aa21.07■□□□□ 0.96
PHGDH-232ENST00000641947 U3KPZ7 1027 aaPredicted RBP21.07■□□□□ 0.96
PHGDH-232ENST00000641947 C10orf71Q711Q0 1435 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 PDS5AQ29RF7 1337 aaKnown RBP21.06■□□□□ 0.96
PHGDH-232ENST00000641947 SEMA3EO15041 775 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 CYP21A2P08686 494 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 MAP3K12Q12852 859 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 C2CD5Q86YS7 1000 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 TBC1D16Q8TBP0 767 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 ZNF384Q8TF68 577 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 JAKMIP1Q96N16 626 aaKnown RBP21.06■□□□□ 0.96
PHGDH-232ENST00000641947 TTC14Q96N46 770 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 GGA1Q9UJY5 639 aa21.06■□□□□ 0.96
PHGDH-232ENST00000641947 CASTP20810 708 aaKnown RBP21.05■□□□□ 0.96
PHGDH-232ENST00000641947 ATP2B4P23634 1241 aa21.05■□□□□ 0.96
PHGDH-232ENST00000641947 CHRNA5P30532 468 aa21.05■□□□□ 0.96
PHGDH-232ENST00000641947 ERICH6Q7L0X2 663 aa21.05■□□□□ 0.96
PHGDH-232ENST00000641947 ADGRA1Q86SQ6 560 aa21.05■□□□□ 0.96
PHGDH-232ENST00000641947 ABCF2Q9UG63 623 aa21.05■□□□□ 0.96
PHGDH-232ENST00000641947 JAG2Q9Y219 1238 aa21.05■□□□□ 0.96
PHGDH-232ENST00000641947 TMC4Q7Z404 712 aa21.05■□□□□ 0.96
PHGDH-232ENST00000641947 ZBTB22O15209 634 aa21.04■□□□□ 0.96
PHGDH-232ENST00000641947 ZKSCAN1P17029 563 aaPredicted RBP21.04■□□□□ 0.96
PHGDH-232ENST00000641947 TSGA10IPQ3SY00 556 aa21.04■□□□□ 0.96
PHGDH-232ENST00000641947 TTLL5Q6EMB2 1281 aa21.04■□□□□ 0.96
PHGDH-232ENST00000641947 ZNF622Q969S3 477 aaKnown RBP eCLIP21.04■□□□□ 0.962e-6■■■□□ 15.2
PHGDH-232ENST00000641947 TM6SF1Q9BZW5 370 aa21.04■□□□□ 0.96
PHGDH-232ENST00000641947 LRP2BPQ9P2M1 347 aa21.04■□□□□ 0.96
PHGDH-232ENST00000641947 ALDH1B1P30837 517 aa21.03■□□□□ 0.96
PHGDH-232ENST00000641947 CHAF1AQ13111 956 aaPredicted RBP21.03■□□□□ 0.96
PHGDH-232ENST00000641947 STOX1Q6ZVD7 989 aa21.03■□□□□ 0.96
PHGDH-232ENST00000641947 ZSWIM6Q9HCJ5 1215 aa21.03■□□□□ 0.96
PHGDH-232ENST00000641947 FRAT2O75474 233 aaPredicted RBP21.02■□□□□ 0.96
PHGDH-232ENST00000641947 RNF20Q5VTR2 975 aa21.02■□□□□ 0.96
PHGDH-232ENST00000641947 TDRD7Q8NHU6 1098 aaKnown RBP21.02■□□□□ 0.96
PHGDH-232ENST00000641947 STYK1Q6J9G0 422 aa21.02■□□□□ 0.96
PHGDH-232ENST00000641947 NOL8Q76FK4 1167 aaKnown RBP21.02■□□□□ 0.96
PHGDH-232ENST00000641947 STRBPQ96SI9 672 aaKnown RBP21.02■□□□□ 0.96
PHGDH-232ENST00000641947 FOXD4L1Q9NU39 408 aa21.02■□□□□ 0.96
PHGDH-232ENST00000641947 H0YIN7 160 aa21.01■□□□□ 0.95
PHGDH-232ENST00000641947 MBD4O95243 580 aa21.01■□□□□ 0.95
PHGDH-232ENST00000641947 DDIT3P35638 169 aa21.01■□□□□ 0.95
PHGDH-232ENST00000641947 ZNF804AQ7Z570 1209 aa21.01■□□□□ 0.95
PHGDH-232ENST00000641947 RAI14Q9P0K7 980 aa21.01■□□□□ 0.95
PHGDH-232ENST00000641947 BAZ2AQ9UIF9 1905 aaKnown RBP21.01■□□□□ 0.95
PHGDH-232ENST00000641947 FGAP02671 866 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 PRDX5P30044 214 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 AK2P54819 239 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 RUFY3Q7L099 469 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 LCORLQ8N3X6 602 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 SLC16A10Q8TF71 515 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 ARMT1Q9H993 441 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 ZNF646O15015 1829 aaPredicted RBP21■□□□□ 0.95
PHGDH-232ENST00000641947 MYH2Q9UKX2 1941 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 C6orf229H3BNL8 230 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 MIGA1Q8NAN2 632 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 TMX3Q96JJ7 454 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 CD209Q9NNX6 404 aa21■□□□□ 0.95
PHGDH-232ENST00000641947 SNED1Q8TER0 1413 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms