RNA–Protein interactions for RNA: ENST00000641923.1

SAMMSON-223, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, human

Gene SAMMSON, Length 1,213 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMMSON-223	ENST00000641923	LMNB1	P20700	586 aa		10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	PDE1A	P54750	535 aa		10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	TTF1	Q15361	905 aa	Predicted RBP	10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	NIM1K	Q8IY84	436 aa		10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	LARGE2	Q8N3Y3	721 aa		10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	FAM84B	Q96KN1	310 aa	Predicted RBP	10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	DBNDD2	Q9BQY9	259 aa		10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	CCDC8	Q9H0W5	538 aa	Predicted RBP	10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SBF1	O95248	1867 aa		10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	PSME4	Q14997	1843 aa		10.93	□□□□□ -0.66
SAMMSON-223	ENST00000641923	MYO3B	Q8WXR4	1341 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SALL3	Q9BXA9	1300 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	IRS2	Q9Y4H2	1338 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	CCDC88A	Q3V6T2	1871 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	EIF5B	O60841	1220 aa	Known RBP	10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	PRR29	P0C7W0	189 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	ARHGAP27	Q6ZUM4	889 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	WDR66	Q8TBY9	1149 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SUGT1	Q9Y2Z0	365 aa		10.92	□□□□□ -0.66
SAMMSON-223	ENST00000641923	NFKBIE	O00221	500 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	FKBP1A	P62942	108 aa	Known RBP	10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	CHADL	Q6NUI6	762 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	PLEKHM2	Q8IWE5	1019 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	CNTROB	Q8N137	903 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	TDRD7	Q8NHU6	1098 aa	Known RBP	10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	CD209	Q9NNX6	404 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	ZNRF3	Q9ULT6	936 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	AK9	Q5TCS8	1911 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	AKAP11	Q9UKA4	1901 aa		10.91	□□□□□ -0.66
SAMMSON-223	ENST00000641923	RFX7	Q2KHR2	1363 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	MAST3	O60307	1309 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	FAM205A	Q6ZU69	1335 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SALL1	Q9NSC2	1324 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	ECE2	O60344	883 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	ADORA1	P30542	326 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	PHKA1	P46020	1223 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	GYG1	P46976	350 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	BCAM	P50895	628 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	TNIP1	Q15025	636 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	AOC3	Q16853	763 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	STRIP1	Q5VSL9	837 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	ZSCAN25	Q6NSZ9	544 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	OLFM4	Q6UX06	510 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SLF2	Q8IX21	1173 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SPATA5	Q8NB90	893 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	HAUS7	Q99871	368 aa		10.9	□□□□□ -0.66
SAMMSON-223	ENST00000641923	SPDYE4	A6NLX3	237 aa		10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	HIP1	O00291	1037 aa		10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	RIMBP2	O15034	1052 aa		10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	ZFY	P08048	801 aa	Predicted RBP	10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	YBX3	P16989	372 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	EIF6	P56537	245 aa	Known RBP	10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	BMP2KL	Q5H9B9	411 aa		10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	CERS3	Q8IU89	383 aa		10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	PI4K2B	Q8TCG2	481 aa		10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	EVI5L	Q96CN4	794 aa		10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	ZNF277	Q9NRM2	450 aa	Predicted RBP	10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	TLR7	Q9NYK1	1049 aa	Known RBP	10.89	□□□□□ -0.67
SAMMSON-223	ENST00000641923	MYH7	P12883	1935 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	USP17L3	A6NCW0	530 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	USP17L4	A6NCW7	530 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	SNAP23	O00161	211 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	RPS12	P25398	132 aa	Known RBP	10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	MCAM	P43121	646 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	RASGRF1	Q13972	1273 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	TTC22	Q5TAA0	569 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	USP17L1	Q7RTZ2	530 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	TXNRD3	Q86VQ6	643 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	AGBL3	Q8NEM8	1001 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	PAG1	Q9NWQ8	432 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	DOCK2	Q92608	1830 aa		10.88	□□□□□ -0.67
SAMMSON-223	ENST00000641923	FZD9	O00144	591 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	KLRK1	P26718	216 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	PDE4A	P27815	886 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	RGS3	P49796	1198 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	MAP3K12	Q12852	859 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	TTLL5	Q6EMB2	1281 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	CIAPIN1	Q6FI81	312 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	DPY19L2	Q6NUT2	758 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	CASC1	Q6TDU7	716 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	C16orf71	Q8IYS4	520 aa	Predicted RBP	10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	BOLA2	Q9H3K6	86 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	DBNDD1	Q9H9R9	158 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	HMG20B	Q9P0W2	317 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	WWC3	Q9ULE0	1092 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	MAST2	Q6P0Q8	1798 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	TIAM2	Q8IVF5	1701 aa		10.87	□□□□□ -0.67
SAMMSON-223	ENST00000641923	GSTO1	P78417	241 aa		10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	HDLBP	Q00341	1268 aa	Known RBP	10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	RASSF7	Q02833	373 aa		10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	DOK7	Q18PE1	504 aa		10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	KBTBD3	Q8NAB2	608 aa		10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	DNAJC2	Q99543	621 aa	Known RBP	10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	MRI	Q9BWK5	157 aa		10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	RNF181	Q9P0P0	153 aa		10.86	□□□□□ -0.67
SAMMSON-223	ENST00000641923	HDAC9	Q9UKV0	1011 aa		10.86	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms