RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 SALL1Q9NSC2 1324 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 SCN9AQ15858 1988 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 ERC2O15083 957 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 IARSP41252 1262 aaKnown RBP11.14□□□□□ -0.63
SCARB2-225ENST00000640900 CAVIN4Q5BKX8 364 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 BMP2KLQ5H9B9 411 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 TTC22Q5TAA0 569 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 TSHZ3Q63HK5 1081 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 ZNF804AQ7Z570 1209 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 PODNQ7Z5L7 613 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 GPATCH3Q96I76 525 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 ZNF277Q9NRM2 450 aaPredicted RBP11.14□□□□□ -0.63
SCARB2-225ENST00000640900 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 PSME4Q14997 1843 aa11.14□□□□□ -0.63
SCARB2-225ENST00000640900 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
SCARB2-225ENST00000640900 YDJCA8MPS7 323 aa11.13□□□□□ -0.63
SCARB2-225ENST00000640900 IGSF3O75054 1194 aa11.13□□□□□ -0.63
SCARB2-225ENST00000640900 AOC3Q16853 763 aa11.13□□□□□ -0.63
SCARB2-225ENST00000640900 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
SCARB2-225ENST00000640900 GNL3LQ9NVN8 582 aaKnown RBP11.13□□□□□ -0.63
SCARB2-225ENST00000640900 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
SCARB2-225ENST00000640900 DENND2AQ9ULE3 1009 aa11.13□□□□□ -0.63
SCARB2-225ENST00000640900 FZD9O00144 591 aa11.12□□□□□ -0.63
SCARB2-225ENST00000640900 PPIP5K2O43314 1243 aa11.12□□□□□ -0.63
SCARB2-225ENST00000640900 CYP2E1P05181 493 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-225ENST00000640900 FKBP1AP62942 108 aaKnown RBP11.12□□□□□ -0.63
SCARB2-225ENST00000640900 TTC39AQ5SRH9 613 aa11.12□□□□□ -0.63
SCARB2-225ENST00000640900 GORABQ5T7V8 394 aa11.12□□□□□ -0.63
SCARB2-225ENST00000640900 PI16Q6UXB8 463 aa11.12□□□□□ -0.63
SCARB2-225ENST00000640900 REM2Q8IYK8 340 aaPredicted RBP11.12□□□□□ -0.63
SCARB2-225ENST00000640900 SPATA5Q8NB90 893 aa11.12□□□□□ -0.63
SCARB2-225ENST00000640900 BOLA2Q9H3K6 86 aa11.12□□□□□ -0.63
SCARB2-225ENST00000640900 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 ECE2O60344 883 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 GRIN3BO60391 1043 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 LMNB1P20700 586 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 ZAP70P43403 619 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 RASSF7Q02833 373 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 STRIP1Q5VSL9 837 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 ARHGAP27Q6ZUM4 889 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 ZNRF3Q9ULT6 936 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 DOCK2Q92608 1830 aa11.11□□□□□ -0.63
SCARB2-225ENST00000640900 VIL1P09327 827 aaKnown RBP11.1□□□□□ -0.63
SCARB2-225ENST00000640900 SDSP20132 328 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 RGS3P49796 1198 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 DACT2Q5SW24 774 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 TMED8Q6PL24 325 aaPredicted RBP11.1□□□□□ -0.63
SCARB2-225ENST00000640900 VPS37DQ86XT2 251 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 LARGE2Q8N3Y3 721 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 WDR66Q8TBY9 1149 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 GMLQ99445 158 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 ANTXR1Q9H6X2 564 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 DBNDD1Q9H9R9 158 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 PIH1D3Q9NQM4 214 aaKnown RBP11.1□□□□□ -0.63
SCARB2-225ENST00000640900 KCNQ5Q9NR82 932 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 PAG1Q9NWQ8 432 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 SUGT1Q9Y2Z0 365 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 RFX7Q2KHR2 1363 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 CCDC88AQ3V6T2 1871 aa11.1□□□□□ -0.63
SCARB2-225ENST00000640900 MYH13Q9UKX3 1938 aa11.09□□□□□ -0.63
SCARB2-225ENST00000640900 CERS5Q8N5B7 392 aa11.09□□□□□ -0.63
SCARB2-225ENST00000640900 KBTBD3Q8NAB2 608 aa11.09□□□□□ -0.63
SCARB2-225ENST00000640900 ZNF384Q8TF68 577 aa11.09□□□□□ -0.63
SCARB2-225ENST00000640900 TBC1D22AQ8WUA7 517 aa11.09□□□□□ -0.63
SCARB2-225ENST00000640900 EDC3Q96F86 508 aaKnown RBP11.09□□□□□ -0.63
SCARB2-225ENST00000640900 SNRKQ9NRH2 765 aa11.09□□□□□ -0.63
SCARB2-225ENST00000640900 NDUFB9Q9Y6M9 179 aa11.09□□□□□ -0.63
SCARB2-225ENST00000640900 ZC3H4Q9UPT8 1303 aaKnown RBP11.09□□□□□ -0.63
SCARB2-225ENST00000640900 USP17L3A6NCW0 530 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 USP17L4A6NCW7 530 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 GOLIM4O00461 696 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 CXCL9Q07325 125 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 TTF1Q15361 905 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-225ENST00000640900 TTLL5Q6EMB2 1281 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 USP17L1Q7RTZ2 530 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 NIM1KQ8IY84 436 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 MRIQ9BWK5 157 aa11.08□□□□□ -0.64
SCARB2-225ENST00000640900 IQSEC3Q9UPP2 1182 aaPredicted RBP11.08□□□□□ -0.64
SCARB2-225ENST00000640900 MYO5AQ9Y4I1 1855 aaKnown RBP11.08□□□□□ -0.64
SCARB2-225ENST00000640900 TCRBV5S4A2TA0A5A2 114 aa11.07□□□□□ -0.64
SCARB2-225ENST00000640900 GTF2IP78347 998 aa11.07□□□□□ -0.64
SCARB2-225ENST00000640900 GRIK5Q16478 980 aa11.07□□□□□ -0.64
SCARB2-225ENST00000640900 GPR162Q16538 588 aa11.07□□□□□ -0.64
SCARB2-225ENST00000640900 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
SCARB2-225ENST00000640900 ZGPATQ8N5A5 531 aaKnown RBP11.07□□□□□ -0.64
SCARB2-225ENST00000640900 JDP2Q8WYK2 163 aa11.07□□□□□ -0.64
SCARB2-225ENST00000640900 FAM163AQ96GL9 167 aaPredicted RBP11.07□□□□□ -0.64
SCARB2-225ENST00000640900 PSMD14O00487 310 aa11.06□□□□□ -0.64
SCARB2-225ENST00000640900 PRDX5P30044 214 aa11.06□□□□□ -0.64
SCARB2-225ENST00000640900 MMP14P50281 582 aa11.06□□□□□ -0.64
SCARB2-225ENST00000640900 UBE3CQ15386 1083 aa11.06□□□□□ -0.64
SCARB2-225ENST00000640900 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
SCARB2-225ENST00000640900 RSBN1LQ6PCB5 846 aaPredicted RBP11.06□□□□□ -0.64
SCARB2-225ENST00000640900 CNTROBQ8N137 903 aa11.06□□□□□ -0.64
SCARB2-225ENST00000640900 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
SCARB2-225ENST00000640900 DNAJC2Q99543 621 aaKnown RBP11.06□□□□□ -0.64
SCARB2-225ENST00000640900 BCL11AQ9H165 835 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms