RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 SIL1Q9H173 461 aa11.89□□□□□ -0.51
SCARB2-214ENST00000638843 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
SCARB2-214ENST00000638843 SCN4AP35499 1836 aa11.89□□□□□ -0.51
SCARB2-214ENST00000638843 SRGAP3O43295 1099 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 GNAI2P04899 355 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 MTX1Q13505 466 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 ZNF804AQ7Z570 1209 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 ITPRIPQ8IWB1 547 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 PANK1Q8TE04 598 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
SCARB2-214ENST00000638843 RCAN3Q9UKA8 241 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 TRAF5O00463 557 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 HIBADHP31937 336 aaKnown RBP11.88□□□□□ -0.51
SCARB2-214ENST00000638843 CERS5Q8N5B7 392 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 JAG2Q9Y219 1238 aa11.88□□□□□ -0.51
SCARB2-214ENST00000638843 ZNF609O15014 1411 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 ADAMTSL1Q8N6G6 1762 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 PNMA6EA0A0J9YXQ4 647 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 ZBTB7BO15156 539 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-214ENST00000638843 CIAO1O76071 339 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 SASH1O94885 1247 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 FGFR2P21802 821 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 KIF4BQ2VIQ3 1234 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 DLK2Q6UY11 383 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 FBXO33Q7Z6M2 555 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 TDRD7Q8NHU6 1098 aaKnown RBP11.87□□□□□ -0.51
SCARB2-214ENST00000638843 GLIS2Q9BZE0 524 aaPredicted RBP11.87□□□□□ -0.51
SCARB2-214ENST00000638843 MYOZ2Q9NPC6 264 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 FBXO3Q9UK99 471 aa11.87□□□□□ -0.51
SCARB2-214ENST00000638843 ASTN2O75129 1339 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-214ENST00000638843 SCN9AQ15858 1988 aa11.86□□□□□ -0.51
SCARB2-214ENST00000638843 IL15P40933 162 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-214ENST00000638843 BCAMP50895 628 aa11.86□□□□□ -0.51
SCARB2-214ENST00000638843 PUM3Q15397 648 aaKnown RBP11.86□□□□□ -0.51
SCARB2-214ENST00000638843 KIAA0825Q8IV33 1275 aa11.86□□□□□ -0.51
SCARB2-214ENST00000638843 YTHDC1Q96MU7 727 aaKnown RBP11.86□□□□□ -0.51
SCARB2-214ENST00000638843 C1orf115Q9H7X2 142 aa11.86□□□□□ -0.51
SCARB2-214ENST00000638843 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
SCARB2-214ENST00000638843 SCARF1Q14162 830 aa11.85□□□□□ -0.51
SCARB2-214ENST00000638843 CST9Q5W186 159 aa11.85□□□□□ -0.51
SCARB2-214ENST00000638843 USP48Q86UV5 1035 aa11.85□□□□□ -0.51
SCARB2-214ENST00000638843 OGFOD1Q8N543 542 aa11.85□□□□□ -0.51
SCARB2-214ENST00000638843 CEP126Q9P2H0 1117 aa11.85□□□□□ -0.51
SCARB2-214ENST00000638843 IQSEC3Q9UPP2 1182 aaPredicted RBP11.85□□□□□ -0.51
SCARB2-214ENST00000638843 SPEF2Q9C093 1822 aa11.85□□□□□ -0.51
SCARB2-214ENST00000638843 TMEM88BA6NKF7 163 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 IFIT1P09914 478 aaKnown RBP11.84□□□□□ -0.51
SCARB2-214ENST00000638843 NBPF9Q3BBW0 867 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 CDC37L1Q7L3B6 337 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 VPS37DQ86XT2 251 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 LPIN2Q92539 896 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 KLRG1Q96E93 195 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 FAM205AQ6ZU69 1335 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 POTEMA6NI47 508 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-214ENST00000638843 CAVIN4Q5BKX8 364 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 GGA3Q9NZ52 723 aa11.84□□□□□ -0.51
SCARB2-214ENST00000638843 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
SCARB2-214ENST00000638843 ADM5C9JUS6 153 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 WNT10BO00744 389 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 CELF2O95319 508 aaKnown RBP11.83□□□□□ -0.52
SCARB2-214ENST00000638843 SLC5A1P13866 664 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 ATP8B2P98198 1209 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 TFCP2Q12800 502 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 ATP2B3Q16720 1220 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 MFSD14BQ5SR56 506 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 C20orf194Q5TEA3 1177 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 ANGEL2Q5VTE6 544 aaKnown RBP11.83□□□□□ -0.52
SCARB2-214ENST00000638843 DCPSQ96C86 337 aaKnown RBP11.83□□□□□ -0.52
SCARB2-214ENST00000638843 MKRN1Q9UHC7 482 aaKnown RBP11.83□□□□□ -0.52
SCARB2-214ENST00000638843 SCAF8Q9UPN6 1271 aaKnown RBP11.83□□□□□ -0.52
SCARB2-214ENST00000638843 COG6Q9Y2V7 657 aa11.83□□□□□ -0.52
SCARB2-214ENST00000638843 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
SCARB2-214ENST00000638843 MS4A1P11836 297 aa11.82□□□□□ -0.52
SCARB2-214ENST00000638843 TIMM10P62072 90 aa11.82□□□□□ -0.52
SCARB2-214ENST00000638843 FKBP1AP62942 108 aaKnown RBP11.82□□□□□ -0.52
SCARB2-214ENST00000638843 MVPQ14764 893 aaKnown RBP11.82□□□□□ -0.52
SCARB2-214ENST00000638843 GRIK5Q16478 980 aa11.82□□□□□ -0.52
SCARB2-214ENST00000638843 SSH3Q8TE77 659 aa11.82□□□□□ -0.52
SCARB2-214ENST00000638843 ZBED3Q96IU2 234 aaPredicted RBP11.82□□□□□ -0.52
SCARB2-214ENST00000638843 PCDHAC2Q9Y5I4 1007 aa11.82□□□□□ -0.52
SCARB2-214ENST00000638843 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-214ENST00000638843 ADORA1P30542 326 aa11.81□□□□□ -0.52
SCARB2-214ENST00000638843 MMP14P50281 582 aa11.81□□□□□ -0.52
SCARB2-214ENST00000638843 CHAF1AQ13111 956 aaPredicted RBP11.81□□□□□ -0.52
SCARB2-214ENST00000638843 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
SCARB2-214ENST00000638843 ZNF408Q9H9D4 720 aa11.81□□□□□ -0.52
SCARB2-214ENST00000638843 HDAC9Q9UKV0 1011 aa11.81□□□□□ -0.52
SCARB2-214ENST00000638843 ABT1Q9ULW3 272 aaKnown RBP11.81□□□□□ -0.52
SCARB2-214ENST00000638843 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
SCARB2-214ENST00000638843 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.52
SCARB2-214ENST00000638843 CEP85Q6P2H3 762 aa11.8□□□□□ -0.52
SCARB2-214ENST00000638843 JMYQ8N9B5 988 aa11.8□□□□□ -0.52
SCARB2-214ENST00000638843 RASSF10A6NK89 507 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 PHKA1P46020 1223 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 DLGAP5Q15398 846 aa11.79□□□□□ -0.52
SCARB2-214ENST00000638843 CFAP100Q494V2 611 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms