RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 DACT2Q5SW24 774 aa23.78■■□□□ 1.4
HLA-A-209ENST00000638375 STRIP1Q5VSL9 837 aa23.78■■□□□ 1.4
HLA-A-209ENST00000638375 TTLL5Q6EMB2 1281 aa23.78■■□□□ 1.4
HLA-A-209ENST00000638375 FBXW7Q969H0 707 aa23.78■■□□□ 1.4
HLA-A-209ENST00000638375 ZNF512BQ96KM6 892 aaPredicted RBP23.78■■□□□ 1.4
HLA-A-209ENST00000638375 PSME4Q14997 1843 aa23.77■■□□□ 1.4
HLA-A-209ENST00000638375 SEMA3EO15041 775 aa23.77■■□□□ 1.4
HLA-A-209ENST00000638375 FRAT2O75474 233 aaPredicted RBP23.77■■□□□ 1.4
HLA-A-209ENST00000638375 VIL1P09327 827 aaKnown RBP23.77■■□□□ 1.4
HLA-A-209ENST00000638375 UQCRFS1P1P0C7P4 283 aa23.77■■□□□ 1.4
HLA-A-209ENST00000638375 MCAMP43121 646 aa23.77■■□□□ 1.4
HLA-A-209ENST00000638375 CHAF1AQ13111 956 aaPredicted RBP23.77■■□□□ 1.4
HLA-A-209ENST00000638375 MXD3Q9BW11 206 aa23.77■■□□□ 1.4
HLA-A-209ENST00000638375 DENND2AQ9ULE3 1009 aa23.77■■□□□ 1.4
HLA-A-209ENST00000638375 DDNO94850 711 aaPredicted RBP23.76■■□□□ 1.39
HLA-A-209ENST00000638375 TNIP1Q15025 636 aa23.76■■□□□ 1.39
HLA-A-209ENST00000638375 PI16Q6UXB8 463 aa23.76■■□□□ 1.39
HLA-A-209ENST00000638375 HMG20BQ9P0W2 317 aa23.76■■□□□ 1.39
HLA-A-209ENST00000638375 GJA3Q9Y6H8 435 aa23.76■■□□□ 1.39
HLA-A-209ENST00000638375 GLTPD2A6NH11 291 aa23.75■■□□□ 1.39
HLA-A-209ENST00000638375 TSHZ3Q63HK5 1081 aa23.75■■□□□ 1.39
HLA-A-209ENST00000638375 RSBN1LQ6PCB5 846 aaPredicted RBP23.75■■□□□ 1.39
HLA-A-209ENST00000638375 GPC2Q8N158 579 aa23.75■■□□□ 1.39
HLA-A-209ENST00000638375 CERS5Q8N5B7 392 aa23.75■■□□□ 1.39
HLA-A-209ENST00000638375 PDE4AP27815 886 aa23.74■■□□□ 1.39
HLA-A-209ENST00000638375 DPY19L2Q6NUT2 758 aa23.74■■□□□ 1.39
HLA-A-209ENST00000638375 SPATA5Q8NB90 893 aa23.74■■□□□ 1.39
HLA-A-209ENST00000638375 ECHDC1Q9NTX5 307 aa23.74■■□□□ 1.39
HLA-A-209ENST00000638375 ZBTB12Q9Y330 459 aaPredicted RBP23.74■■□□□ 1.39
HLA-A-209ENST00000638375 PDS5AQ29RF7 1337 aaKnown RBP23.74■■□□□ 1.39
HLA-A-209ENST00000638375 ATP5JP18859 108 aa23.73■■□□□ 1.39
HLA-A-209ENST00000638375 MX1P20591 662 aa23.73■■□□□ 1.39
HLA-A-209ENST00000638375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.73■■□□□ 1.39
HLA-A-209ENST00000638375 SNRKQ9NRH2 765 aa23.73■■□□□ 1.39
HLA-A-209ENST00000638375 MYH13Q9UKX3 1938 aa23.72■■□□□ 1.39
HLA-A-209ENST00000638375 GMPSP49915 693 aaPredicted RBP23.72■■□□□ 1.39
HLA-A-209ENST00000638375 FKBP1AP62942 108 aaKnown RBP23.72■■□□□ 1.39
HLA-A-209ENST00000638375 MFSD14BQ5SR56 506 aa23.72■■□□□ 1.39
HLA-A-209ENST00000638375 GMLQ99445 158 aa23.72■■□□□ 1.39
HLA-A-209ENST00000638375 NDUFB9Q9Y6M9 179 aa23.72■■□□□ 1.39
HLA-A-209ENST00000638375 AKAP11Q9UKA4 1901 aa23.72■■□□□ 1.39
HLA-A-209ENST00000638375 TTC41PQ6P2S7 1318 aa23.71■■□□□ 1.39
HLA-A-209ENST00000638375 ZAP70P43403 619 aa23.71■■□□□ 1.39
HLA-A-209ENST00000638375 GRIK5Q16478 980 aa23.71■■□□□ 1.39
HLA-A-209ENST00000638375 WDR66Q8TBY9 1149 aa23.71■■□□□ 1.39
HLA-A-209ENST00000638375 GPATCH3Q96I76 525 aa23.71■■□□□ 1.39
HLA-A-209ENST00000638375 BOLA2Q9H3K6 86 aa23.71■■□□□ 1.39
HLA-A-209ENST00000638375 STAP2Q9UGK3 403 aa23.71■■□□□ 1.39
HLA-A-209ENST00000638375 MYO3BQ8WXR4 1341 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 SALL1Q9NSC2 1324 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 SCNN1DP51172 638 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 PDE1AP54750 535 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 PLEKHM2Q8IWE5 1019 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 AGBL3Q8NEM8 1001 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 PI4K2BQ8TCG2 481 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 TBC1D22AQ8WUA7 517 aa23.7■■□□□ 1.38
HLA-A-209ENST00000638375 RPS12P25398 132 aaKnown RBP23.69■■□□□ 1.38
HLA-A-209ENST00000638375 L3MBTL3Q96JM7 780 aaPredicted RBP23.69■■□□□ 1.38
HLA-A-209ENST00000638375 SHTN1A0MZ66 631 aa23.68■■□□□ 1.38
HLA-A-209ENST00000638375 CYP2E1P05181 493 aaPredicted RBP23.68■■□□□ 1.38
HLA-A-209ENST00000638375 TBC1D9Q6ZT07 1266 aa23.68■■□□□ 1.38
HLA-A-209ENST00000638375 SKAP1Q86WV1 359 aa23.68■■□□□ 1.38
HLA-A-209ENST00000638375 DPF2Q92785 391 aa23.68■■□□□ 1.38
HLA-A-209ENST00000638375 HAUS7Q99871 368 aa23.68■■□□□ 1.38
HLA-A-209ENST00000638375 PRDX5P30044 214 aa23.67■■□□□ 1.38
HLA-A-209ENST00000638375 KIAA0825Q8IV33 1275 aa23.67■■□□□ 1.38
HLA-A-209ENST00000638375 DNAJC2Q99543 621 aaKnown RBP23.67■■□□□ 1.38
HLA-A-209ENST00000638375 ANTXR1Q9H6X2 564 aa23.67■■□□□ 1.38
HLA-A-209ENST00000638375 WDR90Q96KV7 1748 aa23.67■■□□□ 1.38
HLA-A-209ENST00000638375 POTECB2RU33 542 aa23.66■■□□□ 1.38
HLA-A-209ENST00000638375 F8W031 263 aaPredicted RBP23.66■■□□□ 1.38
HLA-A-209ENST00000638375 ERC2O15083 957 aa23.66■■□□□ 1.38
HLA-A-209ENST00000638375 GLRX3O76003 335 aaKnown RBP23.66■■□□□ 1.38
HLA-A-209ENST00000638375 YY1P25490 414 aa23.66■■□□□ 1.38
HLA-A-209ENST00000638375 ZNF526Q8TF50 670 aaPredicted RBP23.66■■□□□ 1.38
HLA-A-209ENST00000638375 EDC3Q96F86 508 aaKnown RBP23.66■■□□□ 1.38
HLA-A-209ENST00000638375 OSBPL3Q9H4L5 887 aa23.66■■□□□ 1.38
HLA-A-209ENST00000638375 PIH1D3Q9NQM4 214 aaKnown RBP23.66■■□□□ 1.38
HLA-A-209ENST00000638375 GPRC5DQ9NZD1 345 aa23.66■■□□□ 1.38
HLA-A-209ENST00000638375 ABCF2Q9UG63 623 aa23.66■■□□□ 1.38
HLA-A-209ENST00000638375 AOX1Q06278 1338 aa23.65■■□□□ 1.38
HLA-A-209ENST00000638375 MICALL2Q8IY33 904 aa23.65■■□□□ 1.38
HLA-A-209ENST00000638375 ZGPATQ8N5A5 531 aaKnown RBP23.65■■□□□ 1.38
HLA-A-209ENST00000638375 CNOT7Q9UIV1 285 aaKnown RBP23.65■■□□□ 1.38
HLA-A-209ENST00000638375 GTF3C3Q9Y5Q9 886 aa23.65■■□□□ 1.38
HLA-A-209ENST00000638375 GOLIM4O00461 696 aa23.64■■□□□ 1.37
HLA-A-209ENST00000638375 USP17L8P0C7I0 530 aa23.64■■□□□ 1.37
HLA-A-209ENST00000638375 EPS15P42566 896 aa23.64■■□□□ 1.37
HLA-A-209ENST00000638375 PAG1Q9NWQ8 432 aa23.64■■□□□ 1.37
HLA-A-209ENST00000638375 SUGT1Q9Y2Z0 365 aa23.64■■□□□ 1.37
HLA-A-209ENST00000638375 LDHBP07195 334 aaKnown RBP23.63■■□□□ 1.37
HLA-A-209ENST00000638375 TTF2Q9UNY4 1162 aaKnown RBP23.63■■□□□ 1.37
HLA-A-209ENST00000638375 LMOD1P29536 600 aaPredicted RBP23.62■■□□□ 1.37
HLA-A-209ENST00000638375 ZNF280AP59817 542 aaPredicted RBP23.62■■□□□ 1.37
HLA-A-209ENST00000638375 ERICH6Q7L0X2 663 aa23.62■■□□□ 1.37
HLA-A-209ENST00000638375 NMRK2Q9NPI5 230 aa23.62■■□□□ 1.37
HLA-A-209ENST00000638375 HACL1Q9UJ83 578 aa23.62■■□□□ 1.37
HLA-A-209ENST00000638375 MAP4K4O95819 1239 aaPredicted RBP23.61■■□□□ 1.37
HLA-A-209ENST00000638375 SPTY2D1Q68D10 685 aaPredicted RBP23.61■■□□□ 1.37
HLA-A-209ENST00000638375 ZNF384Q8TF68 577 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms