RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 DCAF8Q5TAQ9 597 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 RGMBQ6NW40 437 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 PAXIP1Q6ZW49 1069 aaPredicted RBP9.91□□□□□ -0.82
PNKP-229ENST00000637897 NOB1Q9ULX3 412 aaKnown RBP9.91□□□□□ -0.82
PNKP-229ENST00000637897 CASP8AP2Q9UKL3 1982 aa9.91□□□□□ -0.82
PNKP-229ENST00000637897 FAM205AQ6ZU69 1335 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 SLC10A3P09131 477 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 FGFR2P21802 821 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 ECE1P42892 770 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 RARSP54136 660 aaKnown RBP9.9□□□□□ -0.82
PNKP-229ENST00000637897 PTPN12Q05209 780 aaKnown RBP9.9□□□□□ -0.82
PNKP-229ENST00000637897 UBE4AQ14139 1066 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 ATG9AQ7Z3C6 839 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 FBXO33Q7Z6M2 555 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 RASAL3Q86YV0 1011 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 CDAN1Q8IWY9 1227 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 MTMR14Q8NCE2 650 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 PRMT6Q96LA8 375 aaPredicted RBP9.9□□□□□ -0.82
PNKP-229ENST00000637897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.9□□□□□ -0.82
PNKP-229ENST00000637897 PAPPA2Q9BXP8 1791 aa9.9□□□□□ -0.82
PNKP-229ENST00000637897 MYO3BQ8WXR4 1341 aa9.89□□□□□ -0.83
PNKP-229ENST00000637897 UBE2Q2LH0YL09 131 aa9.89□□□□□ -0.83
PNKP-229ENST00000637897 FKBP1AP62942 108 aaKnown RBP9.89□□□□□ -0.83
PNKP-229ENST00000637897 KIF23Q02241 960 aaPredicted RBP9.89□□□□□ -0.83
PNKP-229ENST00000637897 CSRNP1Q96S65 589 aa9.89□□□□□ -0.83
PNKP-229ENST00000637897 CNNM1Q9NRU3 951 aa9.89□□□□□ -0.83
PNKP-229ENST00000637897 COL1A1P02452 1464 aaPredicted RBP9.89□□□□□ -0.83
PNKP-229ENST00000637897 SPDYE2BA6NHP3 402 aa9.88□□□□□ -0.83
PNKP-229ENST00000637897 F8W031 263 aaPredicted RBP9.88□□□□□ -0.83
PNKP-229ENST00000637897 SPDYE6P0CI01 402 aa9.88□□□□□ -0.83
PNKP-229ENST00000637897 KCNJ4P48050 445 aa9.88□□□□□ -0.83
PNKP-229ENST00000637897 CFAP100Q494V2 611 aa9.88□□□□□ -0.83
PNKP-229ENST00000637897 C2orf69Q8N8R5 385 aa9.88□□□□□ -0.83
PNKP-229ENST00000637897 MEIS3Q99687 375 aa9.88□□□□□ -0.83
PNKP-229ENST00000637897 SMC4Q9NTJ3 1288 aa9.88□□□□□ -0.83
PNKP-229ENST00000637897 IQSEC3Q9UPP2 1182 aaPredicted RBP9.88□□□□□ -0.83
PNKP-229ENST00000637897 ECM29Q5VYK3 1845 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 CLRN2A0PK11 232 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 BCAR3O75815 825 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 PDE8BO95263 885 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 HIBADHP31937 336 aaKnown RBP9.87□□□□□ -0.83
PNKP-229ENST00000637897 BCAMP50895 628 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 ZNF157P51786 506 aaPredicted RBP9.87□□□□□ -0.83
PNKP-229ENST00000637897 NOGQ13253 232 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 LDLRAD1Q5T700 205 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 AIDAQ96BJ3 306 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 ARAP2Q8WZ64 1704 aa9.87□□□□□ -0.83
PNKP-229ENST00000637897 ZBED9Q6R2W3 1325 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 MROH5Q6ZUA9 1318 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 TAF7LQ5H9L4 462 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 ZNF804AQ7Z570 1209 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 OGFOD1Q8N543 542 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 TEPSINQ96N21 525 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 DEFB129Q9H1M3 183 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 R3HDMLQ9H3Y0 253 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 RNF186Q9NXI6 227 aa9.86□□□□□ -0.83
PNKP-229ENST00000637897 PA2G4Q9UQ80 394 aaKnown RBP9.86□□□□□ -0.83
PNKP-229ENST00000637897 EYA2O00167 538 aa9.85□□□□□ -0.83
PNKP-229ENST00000637897 CT47B1P0C2W7 299 aaPredicted RBP9.85□□□□□ -0.83
PNKP-229ENST00000637897 GJA5P36382 358 aa9.85□□□□□ -0.83
PNKP-229ENST00000637897 FKBP1BP68106 108 aa9.85□□□□□ -0.83
PNKP-229ENST00000637897 PRKG1Q13976 671 aa9.85□□□□□ -0.83
PNKP-229ENST00000637897 METTL24Q5JXM2 366 aa9.85□□□□□ -0.83
PNKP-229ENST00000637897 MFSD14BQ5SR56 506 aa9.85□□□□□ -0.83
PNKP-229ENST00000637897 NBPF12Q5TAG4 269 aaPredicted RBP9.85□□□□□ -0.83
PNKP-229ENST00000637897 INTS3Q68E01 1043 aaKnown RBP9.85□□□□□ -0.83
PNKP-229ENST00000637897 CCDC102AQ96A19 550 aa9.85□□□□□ -0.83
PNKP-229ENST00000637897 LRRFIP2Q9Y608 721 aaKnown RBP9.85□□□□□ -0.83
PNKP-229ENST00000637897 TRIM27P14373 513 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 MMP14P50281 582 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 DLGAP5Q15398 846 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 MAP3K11Q16584 847 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 SPDYE2Q495Y8 402 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 ABHD8Q96I13 439 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 CLMNQ96JQ2 1002 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 TDRD3Q9H7E2 651 aaKnown RBP9.84□□□□□ -0.83
PNKP-229ENST00000637897 ZNF70Q9UC06 446 aaPredicted RBP9.84□□□□□ -0.83
PNKP-229ENST00000637897 HDAC9Q9UKV0 1011 aa9.84□□□□□ -0.83
PNKP-229ENST00000637897 TTF2Q9UNY4 1162 aaKnown RBP9.84□□□□□ -0.83
PNKP-229ENST00000637897 OTOFQ9HC10 1997 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 USP2O75604 605 aaPredicted RBP9.83□□□□□ -0.84
PNKP-229ENST00000637897 TRPA1O75762 1119 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 ADORA1P30542 326 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 CRKP46108 304 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 CAP1Q01518 475 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 MKRN3Q13064 507 aaKnown RBP9.83□□□□□ -0.84
PNKP-229ENST00000637897 RASA3Q14644 834 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 APOBEC3HQ6NTF7 200 aaKnown RBP9.83□□□□□ -0.84
PNKP-229ENST00000637897 APOBEC3FQ8IUX4 373 aaKnown RBP9.83□□□□□ -0.84
PNKP-229ENST00000637897 DZIP1LQ8IYY4 767 aaKnown RBP9.83□□□□□ -0.84
PNKP-229ENST00000637897 ARHGAP45Q92619 1136 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 MCOLN1Q9GZU1 580 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 SIL1Q9H173 461 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 LAMB1P07942 1786 aa9.83□□□□□ -0.84
PNKP-229ENST00000637897 KIF16BQ96L93 1317 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 AKAP11Q9UKA4 1901 aa9.82□□□□□ -0.84
PNKP-229ENST00000637897 UBTFL1P0CB47 393 aaPredicted RBP9.82□□□□□ -0.84
PNKP-229ENST00000637897 RLBP1P12271 317 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms