RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 TMEM106CQ9BVX2 250 aa15.04■□□□□ -0
SYNGAP1-223ENST00000637671 VEZTQ9HBM0 779 aa15.04■□□□□ -0
SYNGAP1-223ENST00000637671 CD209Q9NNX6 404 aa15.04■□□□□ -0
SYNGAP1-223ENST00000637671 SSC5DA1L4H1 1573 aa15.03■□□□□ -0
SYNGAP1-223ENST00000637671 APAF1O14727 1248 aa15.03■□□□□ -0
SYNGAP1-223ENST00000637671 SP3Q02447 781 aa15.03■□□□□ -0
SYNGAP1-223ENST00000637671 BRCA2P51587 3418 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 MYH3P11055 1940 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 CLRN2A0PK11 232 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 F8W031 263 aaPredicted RBP15.02■□□□□ -0
SYNGAP1-223ENST00000637671 H7C1W4 665 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 SPDYE6P0CI01 402 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 EN2P19622 333 aaPredicted RBP15.02■□□□□ -0
SYNGAP1-223ENST00000637671 CHRNDQ07001 517 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 CFAP100Q494V2 611 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 ZNF804AQ7Z570 1209 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 ANKRD13AQ8IZ07 590 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 PLA2G12BQ9BX93 195 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 MYH16Q9H6N6 1097 aa15.02■□□□□ -0
SYNGAP1-223ENST00000637671 RBM5P52756 815 aaKnown RBP eCLIP15.01□□□□□ -0.01
SYNGAP1-223ENST00000637671 TNFAIP1Q13829 316 aa15.01□□□□□ -0.01
SYNGAP1-223ENST00000637671 GCKRQ14397 625 aa15.01□□□□□ -0.01
SYNGAP1-223ENST00000637671 NBPF11Q86T75 865 aa15.01□□□□□ -0.01
SYNGAP1-223ENST00000637671 CERS5Q8N5B7 392 aa15.01□□□□□ -0.01
SYNGAP1-223ENST00000637671 RBBP6Q7Z6E9 1792 aaKnown RBP15.01□□□□□ -0.01
SYNGAP1-223ENST00000637671 ANKRD18BA2A2Z9 1011 aa15□□□□□ -0.01
SYNGAP1-223ENST00000637671 FKBP1AP62942 108 aaKnown RBP15□□□□□ -0.01
SYNGAP1-223ENST00000637671 SLC9C1Q4G0N8 1177 aa15□□□□□ -0.01
SYNGAP1-223ENST00000637671 NBPF12Q5TAG4 269 aaPredicted RBP15□□□□□ -0.01
SYNGAP1-223ENST00000637671 TSPYL6Q8N831 410 aa15□□□□□ -0.01
SYNGAP1-223ENST00000637671 KIAA0100Q14667 2235 aaKnown RBP15□□□□□ -0.01
SYNGAP1-223ENST00000637671 TESPA1A2RU30 521 aaPredicted RBP14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 WDHD1O75717 1129 aaPredicted RBP14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 GJA5P36382 358 aa14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 FXR1P51114 621 aaKnown RBP eCLIP14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 DDX10Q13206 875 aaKnown RBP14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 RASA3Q14644 834 aa14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 C15orf52Q6ZUT6 534 aaKnown RBP14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 PCDHAC2Q9Y5I4 1007 aa14.99□□□□□ -0.01
SYNGAP1-223ENST00000637671 USP2O75604 605 aaPredicted RBP14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 CSF1RP07333 972 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 IL1R1P14778 569 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 IFIT5Q13325 482 aaKnown RBP14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 SLC4A8Q2Y0W8 1093 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 ZNF333Q96JL9 665 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 PTPN18Q99952 460 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 ZFYVE28Q9HCC9 887 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 LAMB1P07942 1786 aa14.98□□□□□ -0.01
SYNGAP1-223ENST00000637671 TAF5LO75529 589 aa14.97□□□□□ -0.01
SYNGAP1-223ENST00000637671 SLC4A2P04920 1241 aa14.97□□□□□ -0.01
SYNGAP1-223ENST00000637671 TAF1CQ15572 869 aaPredicted RBP14.97□□□□□ -0.01
SYNGAP1-223ENST00000637671 CHMP3Q9Y3E7 222 aa14.97□□□□□ -0.01
SYNGAP1-223ENST00000637671 GTF2A2P52657 109 aa14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 CASP7P55210 303 aa14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 FKBP5Q13451 457 aaPredicted RBP14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 TWISTNBQ3B726 338 aaPredicted RBP14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 HELBQ8NG08 1087 aaPredicted RBP14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 LINS1Q8NG48 757 aa14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 TSR2Q969E8 191 aaKnown RBP14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 JAG2Q9Y219 1238 aa14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 CSADQ9Y600 493 aa14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 ECM29Q5VYK3 1845 aa14.96□□□□□ -0.01
SYNGAP1-223ENST00000637671 IRS2Q9Y4H2 1338 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 CCL15-CCL14A0A0B4J2E2 113 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 SNAP23O00161 211 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 FLIIQ13045 1269 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 KIF22Q14807 665 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 CCL15Q16663 113 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 G2E3Q7L622 706 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 DNAAF4Q8WXU2 420 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 BRI3BPQ8WY22 251 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 COLQQ9Y215 455 aaPredicted RBP14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 PTCH2Q9Y6C5 1203 aa14.95□□□□□ -0.02
SYNGAP1-223ENST00000637671 AOX1Q06278 1338 aa14.94□□□□□ -0.02
SYNGAP1-223ENST00000637671 TNNI2P48788 182 aa14.94□□□□□ -0.02
SYNGAP1-223ENST00000637671 TAF7LQ5H9L4 462 aa14.94□□□□□ -0.02
SYNGAP1-223ENST00000637671 MS4A4AQ96JQ5 239 aa14.94□□□□□ -0.02
SYNGAP1-223ENST00000637671 ZNF70Q9UC06 446 aaPredicted RBP14.94□□□□□ -0.02
SYNGAP1-223ENST00000637671 SERPINA10Q9UK55 444 aa14.94□□□□□ -0.02
SYNGAP1-223ENST00000637671 MAP3K9P80192 1104 aa14.93□□□□□ -0.02
SYNGAP1-223ENST00000637671 CAP1Q01518 475 aa14.93□□□□□ -0.02
SYNGAP1-223ENST00000637671 VGLL4Q14135 290 aa14.93□□□□□ -0.02
SYNGAP1-223ENST00000637671 MFSD14BQ5SR56 506 aa14.93□□□□□ -0.02
SYNGAP1-223ENST00000637671 CNNM1Q9NRU3 951 aa14.93□□□□□ -0.02
SYNGAP1-223ENST00000637671 TTF2Q9UNY4 1162 aaKnown RBP14.93□□□□□ -0.02
SYNGAP1-223ENST00000637671 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 PLIN1O60240 522 aa14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 MYCP01106 439 aaPredicted RBP14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 CCDC57Q2TAC2 916 aa14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 LDHAL6AQ6ZMR3 332 aa14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 OTUD5Q96G74 571 aa14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 TDRD3Q9H7E2 651 aaKnown RBP14.92□□□□□ -0.02
SYNGAP1-223ENST00000637671 TCP10L2B9ZVM9 353 aa14.91□□□□□ -0.02
SYNGAP1-223ENST00000637671 H0YGN5 161 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms