RNA–Protein interactions for RNA: ENST00000637439.1

CIITA-215, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-215ENST00000637439 ANGEL1Q9UNK9 670 aaKnown RBP22.69■■□□□ 1.22
CIITA-215ENST00000637439 GPR25O00155 361 aa22.68■■□□□ 1.22
CIITA-215ENST00000637439 MKRN3Q13064 507 aaKnown RBP22.68■■□□□ 1.22
CIITA-215ENST00000637439 CCDC57Q2TAC2 916 aa22.68■■□□□ 1.22
CIITA-215ENST00000637439 HPS5Q9UPZ3 1129 aa22.68■■□□□ 1.22
CIITA-215ENST00000637439 ECM29Q5VYK3 1845 aa22.68■■□□□ 1.22
CIITA-215ENST00000637439 A0A1B0GUL6 1792 aa22.68■■□□□ 1.22
CIITA-215ENST00000637439 F6X3S4 739 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 SNAP23O00161 211 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 ALDH1A1P00352 501 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 INHBEP58166 350 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 TAF7LQ5H9L4 462 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 SPRYD7Q5W111 196 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 LMBR1LQ6UX01 489 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 CERS5Q8N5B7 392 aa22.67■■□□□ 1.22
CIITA-215ENST00000637439 SALL2Q9Y467 1007 aaPredicted RBP22.67■■□□□ 1.22
CIITA-215ENST00000637439 UNCXA6NJT0 531 aa22.66■■□□□ 1.22
CIITA-215ENST00000637439 GRM8O00222 908 aa22.66■■□□□ 1.22
CIITA-215ENST00000637439 PPP1R12BO60237 982 aaPredicted RBP22.66■■□□□ 1.22
CIITA-215ENST00000637439 MAP3K11Q16584 847 aa22.66■■□□□ 1.22
CIITA-215ENST00000637439 LDHAL6AQ6ZMR3 332 aa22.66■■□□□ 1.22
CIITA-215ENST00000637439 SLC10A4Q96EP9 437 aa22.66■■□□□ 1.22
CIITA-215ENST00000637439 MANSC4A6NHS7 340 aaPredicted RBP22.65■■□□□ 1.22
CIITA-215ENST00000637439 ANP32CO43423 234 aa22.65■■□□□ 1.22
CIITA-215ENST00000637439 SUPT20HL1Q3ZLR7 823 aa22.65■■□□□ 1.22
CIITA-215ENST00000637439 CFAP100Q494V2 611 aa22.65■■□□□ 1.22
CIITA-215ENST00000637439 CNNM1Q9NRU3 951 aa22.65■■□□□ 1.22
CIITA-215ENST00000637439 SPDYE2BA6NHP3 402 aa22.64■■□□□ 1.21
CIITA-215ENST00000637439 F8W031 263 aaPredicted RBP22.64■■□□□ 1.21
CIITA-215ENST00000637439 FKTNO75072 461 aa22.64■■□□□ 1.21
CIITA-215ENST00000637439 SPDYE6P0CI01 402 aa22.64■■□□□ 1.21
CIITA-215ENST00000637439 ZBTB48P10074 688 aaPredicted RBP22.64■■□□□ 1.21
CIITA-215ENST00000637439 C9orf78Q9NZ63 289 aaPredicted RBP22.64■■□□□ 1.21
CIITA-215ENST00000637439 PDE4DIPQ5VU43 2346 aa22.63■■□□□ 1.21
CIITA-215ENST00000637439 ALDH1L1O75891 902 aa22.63■■□□□ 1.21
CIITA-215ENST00000637439 FBXO46Q6PJ61 603 aaPredicted RBP22.63■■□□□ 1.21
CIITA-215ENST00000637439 PLIN1O60240 522 aa22.62■■□□□ 1.21
CIITA-215ENST00000637439 EPHA10Q5JZY3 1008 aa22.62■■□□□ 1.21
CIITA-215ENST00000637439 ZNF594Q96JF6 807 aaPredicted RBP22.62■■□□□ 1.21
CIITA-215ENST00000637439 PRMT6Q96LA8 375 aaPredicted RBP22.62■■□□□ 1.21
CIITA-215ENST00000637439 CLRN2A0PK11 232 aa22.61■■□□□ 1.21
CIITA-215ENST00000637439 RBM5P52756 815 aaKnown RBP eCLIP22.61■■□□□ 1.21
CIITA-215ENST00000637439 VEZTQ9HBM0 779 aa22.61■■□□□ 1.21
CIITA-215ENST00000637439 FAM205AQ6ZU69 1335 aa22.6■■□□□ 1.21
CIITA-215ENST00000637439 SSC5DA1L4H1 1573 aa22.6■■□□□ 1.21
CIITA-215ENST00000637439 IREB2P48200 963 aaKnown RBP22.6■■□□□ 1.21
CIITA-215ENST00000637439 UBE4AQ14139 1066 aa22.6■■□□□ 1.21
CIITA-215ENST00000637439 IFNL1Q8IU54 200 aa22.6■■□□□ 1.21
CIITA-215ENST00000637439 SRCIN1Q9C0H9 1055 aa22.6■■□□□ 1.21
CIITA-215ENST00000637439 FZD1Q9UP38 647 aa22.6■■□□□ 1.21
CIITA-215ENST00000637439 PCDHAC2Q9Y5I4 1007 aa22.6■■□□□ 1.21
CIITA-215ENST00000637439 TNFAIP1Q13829 316 aa22.59■■□□□ 1.21
CIITA-215ENST00000637439 SLC4A10Q6U841 1118 aa22.59■■□□□ 1.21
CIITA-215ENST00000637439 WNK4Q96J92 1243 aa22.59■■□□□ 1.21
CIITA-215ENST00000637439 SPINK5Q9NQ38 1064 aaPredicted RBP22.59■■□□□ 1.21
CIITA-215ENST00000637439 LAMB1P07942 1786 aa22.58■■□□□ 1.21
CIITA-215ENST00000637439 HIBADHP31937 336 aaKnown RBP22.58■■□□□ 1.21
CIITA-215ENST00000637439 NBPF12Q5TAG4 269 aaPredicted RBP22.58■■□□□ 1.21
CIITA-215ENST00000637439 TDRD7Q8NHU6 1098 aaKnown RBP22.58■■□□□ 1.21
CIITA-215ENST00000637439 CLMNQ96JQ2 1002 aa22.58■■□□□ 1.21
CIITA-215ENST00000637439 R3HDMLQ9H3Y0 253 aa22.58■■□□□ 1.21
CIITA-215ENST00000637439 SERPINA10Q9UK55 444 aa22.58■■□□□ 1.21
CIITA-215ENST00000637439 JAG2Q9Y219 1238 aa22.58■■□□□ 1.21
CIITA-215ENST00000637439 RASA3Q14644 834 aa22.57■■□□□ 1.2
CIITA-215ENST00000637439 MFSD14BQ5SR56 506 aa22.57■■□□□ 1.2
CIITA-215ENST00000637439 OTUD7BQ6GQQ9 843 aa22.57■■□□□ 1.2
CIITA-215ENST00000637439 ANKRD13AQ8IZ07 590 aa22.57■■□□□ 1.2
CIITA-215ENST00000637439 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
CIITA-215ENST00000637439 USP2O75604 605 aaPredicted RBP22.55■■□□□ 1.2
CIITA-215ENST00000637439 SPDYE2Q495Y8 402 aa22.55■■□□□ 1.2
CIITA-215ENST00000637439 PRPF38BQ5VTL8 546 aaKnown RBP22.55■■□□□ 1.2
CIITA-215ENST00000637439 FAM84BQ96KN1 310 aaPredicted RBP22.55■■□□□ 1.2
CIITA-215ENST00000637439 TTF2Q9UNY4 1162 aaKnown RBP22.55■■□□□ 1.2
CIITA-215ENST00000637439 MROH5Q6ZUA9 1318 aa22.55■■□□□ 1.2
CIITA-215ENST00000637439 GYG1P46976 350 aa22.54■■□□□ 1.2
CIITA-215ENST00000637439 SUCLG2Q96I99 432 aa22.54■■□□□ 1.2
CIITA-215ENST00000637439 ZNF70Q9UC06 446 aaPredicted RBP22.54■■□□□ 1.2
CIITA-215ENST00000637439 IGF2BP3O00425 579 aaKnown RBP eCLIP22.53■■□□□ 1.2
CIITA-215ENST00000637439 ARAP2Q8WZ64 1704 aa22.53■■□□□ 1.2
CIITA-215ENST00000637439 UTYO14607 1347 aa22.53■■□□□ 1.2
CIITA-215ENST00000637439 AOX1Q06278 1338 aa22.53■■□□□ 1.2
CIITA-215ENST00000637439 TNNI2P48788 182 aa22.52■■□□□ 1.2
CIITA-215ENST00000637439 VPS37DQ86XT2 251 aa22.52■■□□□ 1.2
CIITA-215ENST00000637439 DZIP1LQ8IYY4 767 aaKnown RBP22.52■■□□□ 1.2
CIITA-215ENST00000637439 ERO1AQ96HE7 468 aa22.52■■□□□ 1.2
CIITA-215ENST00000637439 PUS3Q9BZE2 481 aaKnown RBP22.52■■□□□ 1.2
CIITA-215ENST00000637439 TDRD3Q9H7E2 651 aaKnown RBP22.52■■□□□ 1.2
CIITA-215ENST00000637439 RIPOR2Q9Y4F9 1068 aa22.52■■□□□ 1.2
CIITA-215ENST00000637439 TRIM17Q9Y577 477 aa22.52■■□□□ 1.2
CIITA-215ENST00000637439 NBPF7P0C2Y1 421 aaPredicted RBP22.51■■□□□ 1.19
CIITA-215ENST00000637439 FAM9BQ8IZU0 186 aa22.51■■□□□ 1.19
CIITA-215ENST00000637439 KAZALD1Q96I82 304 aa22.51■■□□□ 1.19
CIITA-215ENST00000637439 TESPA1A2RU30 521 aaPredicted RBP22.5■■□□□ 1.19
CIITA-215ENST00000637439 ZEB1P37275 1124 aaPredicted RBP22.5■■□□□ 1.19
CIITA-215ENST00000637439 CRKP46108 304 aa22.5■■□□□ 1.19
CIITA-215ENST00000637439 RABL6Q3YEC7 729 aaPredicted RBP22.5■■□□□ 1.19
CIITA-215ENST00000637439 CAVIN4Q5BKX8 364 aa22.5■■□□□ 1.19
CIITA-215ENST00000637439 INTS3Q68E01 1043 aaKnown RBP22.5■■□□□ 1.19
CIITA-215ENST00000637439 OTOP1Q7RTM1 612 aa22.5■■□□□ 1.19
CIITA-215ENST00000637439 TBC1D22AQ8WUA7 517 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms