RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TDRD7Q8NHU6 1098 aaKnown RBP21.17■□□□□ 0.98
CLN6-218ENST00000637223 EAF2Q96CJ1 260 aaPredicted RBP21.17■□□□□ 0.98
CLN6-218ENST00000637223 MXD3Q9BW11 206 aa21.17■□□□□ 0.98
CLN6-218ENST00000637223 ZBTB12Q9Y330 459 aaPredicted RBP21.17■□□□□ 0.98
CLN6-218ENST00000637223 FRAT2O75474 233 aaPredicted RBP21.16■□□□□ 0.98
CLN6-218ENST00000637223 POTEIP0CG38 1075 aa21.16■□□□□ 0.98
CLN6-218ENST00000637223 POTEJP0CG39 1038 aa21.16■□□□□ 0.98
CLN6-218ENST00000637223 GMPSP49915 693 aaPredicted RBP21.16■□□□□ 0.98
CLN6-218ENST00000637223 GORABQ5T7V8 394 aa21.16■□□□□ 0.98
CLN6-218ENST00000637223 CCDC102BQ68D86 513 aa21.16■□□□□ 0.98
CLN6-218ENST00000637223 AACSQ86V21 672 aa21.16■□□□□ 0.98
CLN6-218ENST00000637223 DBNDD2Q9BQY9 259 aa21.16■□□□□ 0.98
CLN6-218ENST00000637223 CCDC8Q9H0W5 538 aaPredicted RBP21.16■□□□□ 0.98
CLN6-218ENST00000637223 TLR7Q9NYK1 1049 aaKnown RBP21.16■□□□□ 0.98
CLN6-218ENST00000637223 SMARCA5O60264 1052 aaPredicted RBP21.15■□□□□ 0.98
CLN6-218ENST00000637223 VIL1P09327 827 aaKnown RBP21.15■□□□□ 0.98
CLN6-218ENST00000637223 CTCFP49711 727 aaPredicted RBP21.15■□□□□ 0.98
CLN6-218ENST00000637223 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
CLN6-218ENST00000637223 DACT2Q5SW24 774 aa21.15■□□□□ 0.98
CLN6-218ENST00000637223 STRIP1Q5VSL9 837 aa21.15■□□□□ 0.98
CLN6-218ENST00000637223 TTLL5Q6EMB2 1281 aa21.15■□□□□ 0.98
CLN6-218ENST00000637223 RSBN1LQ6PCB5 846 aaPredicted RBP21.15■□□□□ 0.98
CLN6-218ENST00000637223 AIDAQ96BJ3 306 aa21.15■□□□□ 0.98
CLN6-218ENST00000637223 LRRCC1Q9C099 1032 aa21.15■□□□□ 0.98
CLN6-218ENST00000637223 CNTNAP1P78357 1384 aa21.14■□□□□ 0.98
CLN6-218ENST00000637223 NEFLP07196 543 aa21.14■□□□□ 0.97
CLN6-218ENST00000637223 CLASRPQ8N2M8 674 aaKnown RBP21.14■□□□□ 0.97
CLN6-218ENST00000637223 L3MBTL3Q96JM7 780 aaPredicted RBP21.14■□□□□ 0.97
CLN6-218ENST00000637223 RWDD1Q9H446 243 aaPredicted RBP21.14■□□□□ 0.97
CLN6-218ENST00000637223 GNL3LQ9NVN8 582 aaKnown RBP21.14■□□□□ 0.97
CLN6-218ENST00000637223 IGHDP01880 384 aa21.13■□□□□ 0.97
CLN6-218ENST00000637223 SCNN1DP51172 638 aa21.13■□□□□ 0.97
CLN6-218ENST00000637223 DBNLQ9UJU6 430 aaKnown RBP21.13■□□□□ 0.97
CLN6-218ENST00000637223 SCN9AQ15858 1988 aa21.13■□□□□ 0.97
CLN6-218ENST00000637223 FAM205AQ6ZU69 1335 aa21.11■□□□□ 0.97
CLN6-218ENST00000637223 SHTN1A0MZ66 631 aa21.11■□□□□ 0.97
CLN6-218ENST00000637223 RPS12P25398 132 aaKnown RBP21.11■□□□□ 0.97
CLN6-218ENST00000637223 LMOD1P29536 600 aaPredicted RBP21.11■□□□□ 0.97
CLN6-218ENST00000637223 LBX1P52954 281 aa21.11■□□□□ 0.97
CLN6-218ENST00000637223 GPRC5DQ9NZD1 345 aa21.11■□□□□ 0.97
CLN6-218ENST00000637223 HACL1Q9UJ83 578 aa21.11■□□□□ 0.97
CLN6-218ENST00000637223 ARAP2Q8WZ64 1704 aa21.11■□□□□ 0.97
CLN6-218ENST00000637223 COL1A1P02452 1464 aaPredicted RBP21.1■□□□□ 0.97
CLN6-218ENST00000637223 IFIT2P09913 472 aaKnown RBP21.1■□□□□ 0.97
CLN6-218ENST00000637223 EPS15P42566 896 aa21.1■□□□□ 0.97
CLN6-218ENST00000637223 VEGFBP49765 207 aa21.1■□□□□ 0.97
CLN6-218ENST00000637223 CCDC158Q5M9N0 1113 aa21.1■□□□□ 0.97
CLN6-218ENST00000637223 TTC39AQ5SRH9 613 aa21.1■□□□□ 0.97
CLN6-218ENST00000637223 CERS5Q8N5B7 392 aa21.1■□□□□ 0.97
CLN6-218ENST00000637223 AGBL3Q8NEM8 1001 aa21.1■□□□□ 0.97
CLN6-218ENST00000637223 GCC1Q96CN9 775 aa21.1■□□□□ 0.97
CLN6-218ENST00000637223 CNOT7Q9UIV1 285 aaKnown RBP21.1■□□□□ 0.97
CLN6-218ENST00000637223 IQCA1LA6NCM1 817 aa21.09■□□□□ 0.97
CLN6-218ENST00000637223 RASGRF1Q13972 1273 aa21.09■□□□□ 0.97
CLN6-218ENST00000637223 MFSD14BQ5SR56 506 aa21.09■□□□□ 0.97
CLN6-218ENST00000637223 MICALL2Q8IY33 904 aa21.09■□□□□ 0.97
CLN6-218ENST00000637223 DPF2Q92785 391 aa21.09■□□□□ 0.97
CLN6-218ENST00000637223 GMLQ99445 158 aa21.09■□□□□ 0.97
CLN6-218ENST00000637223 DENND2AQ9ULE3 1009 aa21.09■□□□□ 0.97
CLN6-218ENST00000637223 MYO3BQ8WXR4 1341 aa21.08■□□□□ 0.97
CLN6-218ENST00000637223 SEMA3EO15041 775 aa21.08■□□□□ 0.97
CLN6-218ENST00000637223 ANKRD45Q5TZF3 282 aa21.08■□□□□ 0.97
CLN6-218ENST00000637223 KIAA0825Q8IV33 1275 aa21.08■□□□□ 0.97
CLN6-218ENST00000637223 TAF1DQ9H5J8 278 aaPredicted RBP21.08■□□□□ 0.97
CLN6-218ENST00000637223 PASKQ96RG2 1323 aa21.07■□□□□ 0.96
CLN6-218ENST00000637223 F8W031 263 aaPredicted RBP21.07■□□□□ 0.96
CLN6-218ENST00000637223 UQCRFS1P1P0C7P4 283 aa21.07■□□□□ 0.96
CLN6-218ENST00000637223 ARID4AP29374 1257 aaPredicted RBP21.07■□□□□ 0.96
CLN6-218ENST00000637223 EPHX2P34913 555 aa21.07■□□□□ 0.96
CLN6-218ENST00000637223 SCARF1Q14162 830 aa21.07■□□□□ 0.96
CLN6-218ENST00000637223 PI16Q6UXB8 463 aa21.07■□□□□ 0.96
CLN6-218ENST00000637223 ABHD8Q96I13 439 aa21.07■□□□□ 0.96
CLN6-218ENST00000637223 WBP1LQ9NX94 342 aa21.07■□□□□ 0.96
CLN6-218ENST00000637223 H7C1D1 291 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 USP17L8P0C7I0 530 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 MCAMP43121 646 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 FKBP1AP62942 108 aaKnown RBP21.06■□□□□ 0.96
CLN6-218ENST00000637223 GRIK5Q16478 980 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 B4GALNT3Q6L9W6 998 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 SMC5Q8IY18 1101 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 TBC1D22AQ8WUA7 517 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 HMG20BQ9P0W2 317 aa21.06■□□□□ 0.96
CLN6-218ENST00000637223 ZBTB47Q9UFB7 747 aaPredicted RBP21.06■□□□□ 0.96
CLN6-218ENST00000637223 TMEM88BA6NKF7 163 aa21.05■□□□□ 0.96
CLN6-218ENST00000637223 EAPPQ56P03 285 aaPredicted RBP21.05■□□□□ 0.96
CLN6-218ENST00000637223 LDHDQ86WU2 507 aa21.05■□□□□ 0.96
CLN6-218ENST00000637223 SPATA5Q8NB90 893 aa21.05■□□□□ 0.96
CLN6-218ENST00000637223 WDR66Q8TBY9 1149 aa21.05■□□□□ 0.96
CLN6-218ENST00000637223 SNRKQ9NRH2 765 aa21.05■□□□□ 0.96
CLN6-218ENST00000637223 ADARB2Q9NS39 739 aaKnown RBP21.05■□□□□ 0.96
CLN6-218ENST00000637223 ZNF646O15015 1829 aaPredicted RBP21.04■□□□□ 0.96
CLN6-218ENST00000637223 ZBTB22O15209 634 aa21.04■□□□□ 0.96
CLN6-218ENST00000637223 TBC1D10BQ4KMP7 808 aaPredicted RBP21.04■□□□□ 0.96
CLN6-218ENST00000637223 RBM26Q5T8P6 1007 aaKnown RBP21.04■□□□□ 0.96
CLN6-218ENST00000637223 SAMD7Q7Z3H4 446 aa21.04■□□□□ 0.96
CLN6-218ENST00000637223 TRPM4Q8TD43 1214 aa21.04■□□□□ 0.96
CLN6-218ENST00000637223 PSME4Q14997 1843 aa21.04■□□□□ 0.96
CLN6-218ENST00000637223 EGFRP00533 1210 aa21.03■□□□□ 0.96
CLN6-218ENST00000637223 ZNF280AP59817 542 aaPredicted RBP21.03■□□□□ 0.96
CLN6-218ENST00000637223 OGFOD1Q8N543 542 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms